RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 TMEM221A6NGB7 291 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 C19orf81C9J6K1 198 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 TRIM77I1YAP6 450 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 OR10H2O60403 315 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 C22orf31O95567 290 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 IGLV2-11P01706 119 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 IGHV4-39P01824 125 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 ATP1A1P05023 1023 aaKnown RBP2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 OR52Z1P0C646 297 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 DANCRP0C864 163 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 THEGLP0DJG4 465 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 AMD1P17707 334 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 ACHEP22303 614 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 HNF4AP41235 474 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 MTHFRP42898 656 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 GLIPR1P48060 266 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 HOXA1P49639 335 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZNF41P51814 821 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZNF131P52739 623 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 THOP1P52888 689 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 RPS18P62269 152 aaKnown RBP2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 RBPJQ06330 500 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 TFCP2Q12800 502 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 ILF3Q12906 894 aaKnown RBP eCLIP2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 GAGE5Q13069 117 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 GAGE6Q13070 117 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 MFAP5Q13361 173 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 COG2Q14746 738 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 PTPRCAPQ14761 206 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 KIR2DS3Q14952 304 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 TNIP1Q15025 636 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 VWC2Q2TAL6 325 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 CCDC158Q5M9N0 1113 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 LCE3CQ5T5A8 94 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 LCE3AQ5TA76 89 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 IL27RAQ6UWB1 636 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZBTB49Q6ZSB9 765 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 FAM47EQ6ZV65 393 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 C9orf139Q6ZV77 190 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 RAPH1Q70E73 1250 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 DGLUCYQ7Z3D6 616 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 CCDC186Q7Z3E2 898 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 DNAJB7Q7Z6W7 309 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 COMMD2Q86X83 199 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 UNC45BQ8IWX7 931 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 GPALPP1Q8IXQ4 340 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 NUP93Q8N1F7 819 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 ARHGAP24Q8N264 748 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 CPSF7Q8N684 471 aaKnown RBP2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 CAMKVQ8NCB2 501 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 SLC24A4Q8NFF2 622 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 DBF4BQ8NFT6 615 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 MGARPQ8TDB4 240 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 RNF128Q8TEB7 428 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 ARSGQ96EG1 525 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 C17orf77Q96MU5 243 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 SEPHS2Q99611 448 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 GPATCH1Q9BRR8 931 aaKnown RBP2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 BTBD10Q9BSF8 475 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 TRAF4Q9BUZ4 470 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 FAM129AQ9BZQ8 928 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 PELI2Q9HAT8 420 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 UPF2Q9HAU5 1272 aaKnown RBP2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 TRPV4Q9HBA0 871 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 TCF7L2Q9NQB0 619 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 OLFML3Q9NRN5 406 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 DONSONQ9NYP3 566 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 TUBE1Q9UJT0 475 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 ANAPC5Q9UJX4 755 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 GTF3C4Q9UKN8 822 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 PADI2Q9Y2J8 665 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 KNSTRNQ9Y448 316 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 JRKLQ9Y4A0 524 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 NME7Q9Y5B8 376 aa2.28□□□□□ -2.04
HMGB1P35-201ENST00000503360 PRR32B1ATL7 298 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 CPLX1O14810 134 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 XPNPEP2O43895 674 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 HMMRO75330 724 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 SLU7O95391 586 aaKnown RBP2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 TGDSO95455 350 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 CRYAAP02489 173 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 NR3C1P04150 777 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 F7P08709 466 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 FDPSP14324 419 aaKnown RBP2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 NR1D1P20393 614 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 MSH3P20585 1137 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 SP100P23497 879 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 AZGP1P25311 298 aaKnown RBP2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 PTPN3P26045 913 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 EPHA2P29317 976 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 KIF5BP33176 963 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 KRT2P35908 639 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 CCR10P46092 362 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 BPIFB3P59826 476 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 PPARDQ03181 441 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 ACSM1Q08AH1 577 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 DMPKQ09013 629 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 PLA2G4FQ68DD2 849 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 CORO6Q6QEF8 472 aa2.27□□□□□ -2.05
HMGB1P35-201ENST00000503360 CASC1Q6TDU7 716 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms