RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	CCDC38	Q502W7	563 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	DNAJC21	Q5F1R6	531 aa	Known RBP	7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	PCID2	Q5JVF3	399 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	FNBP1L	Q5T0N5	605 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	SEL1L3	Q68CR1	1132 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	IL27RA	Q6UWB1	636 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	HSD11B1L	Q7Z5J1	315 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	PDIK1L	Q8N165	341 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	MPP5	Q8N3R9	675 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	TTC30B	Q8N4P2	665 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	ZCCHC9	Q8N567	271 aa	Known RBP	7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	PIK3C3	Q8NEB9	887 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	PPHLN1	Q8NEY8	458 aa	Known RBP	7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	FBXO25	Q8TCJ0	367 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	BRSK1	Q8TDC3	778 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	IFT81	Q8WYA0	676 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	EID2B	Q96D98	161 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	COQ10A	Q96MF6	247 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	RANBP9	Q96S59	729 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	C1QTNF7	Q9BXJ2	289 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	FAM129A	Q9BZQ8	928 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	ERVMER34-1	Q9H9K5	563 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	GDF3	Q9NR23	364 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	ZDHHC18	Q9NUE0	388 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	SYBU	Q9NX95	663 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	KCTD5	Q9NXV2	234 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	VWA7	Q9Y334	891 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	ARL5A	Q9Y689	179 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	SLCO1B1	Q9Y6L6	691 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	TNRC6B	Q9UPQ9	1833 aa	Known RBP	7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	CFAP54	Q96N23	3096 aa		7.31	□□□□□ -1.24
GARNL3-222	ENST00000498801	ATXN2	Q99700	1313 aa	Known RBP	7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	NUMA1	Q14980	2115 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	PCDH15	Q96QU1	1955 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	CCDC78	A2IDD5	438 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	SH3D21	A4FU49	640 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	RGSL1	A5PLK6	1076 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	MROH6	A6NGR9	719 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	SDR42E2	A6NKP2	422 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801		E7ESA3	106 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	STX7	O15400	261 aa	Known RBP	7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	YKT6	O15498	198 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	BUD23	O43709	281 aa	Known RBP	7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	DFNA5	O60443	496 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	MAGEC1	O60732	1142 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	RECQL5	O94762	991 aa	Predicted RBP	7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	HOXC4	P09017	264 aa	Predicted RBP	7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	LTA4H	P09960	611 aa	Known RBP	7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	CTSS	P25774	331 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	ECHS1	P30084	290 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	MAT2A	P31153	395 aa	Known RBP	7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	AKT2	P31751	481 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	SPINT3	P49223	89 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	CARS	P49589	748 aa	Known RBP	7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	ZNF140	P52738	457 aa	Predicted RBP	7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	NXPH1	P58417	271 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	DCDC1	P59894	354 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	PFN3	P60673	137 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	BNC1	Q01954	994 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	MGAT2	Q10469	447 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	GRIK2	Q13002	908 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	SLC14A1	Q13336	389 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	ARMC3	Q5W041	872 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	CASC4	Q6P4E1	433 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	GCNT7	Q6ZNI0	430 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801		Q6ZVL8	140 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	CENPU	Q71F23	418 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	LARP4	Q71RC2	724 aa	Known RBP eCLIP	7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	NLRP9	Q7RTR0	991 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	TECPR1	Q7Z6L1	1165 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	NRSN1	Q8IZ57	195 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	PRR18	Q8N4B5	295 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	DEFB119	Q8N690	84 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	TP53I13	Q8NBR0	393 aa	Predicted RBP	7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	GPR156	Q8NFN8	814 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	OR2I1P	Q8NGU4	316 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	DTX3L	Q8TDB6	740 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	KLK6	Q92876	244 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	CENPT	Q96BT3	561 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	NUS1	Q96E22	293 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	MVB12A	Q96EY5	273 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	DTD2	Q96FN9	168 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	TBATA	Q96M53	351 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	KIFC1	Q9BW19	673 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	NUSAP1	Q9BXS6	441 aa	Known RBP	7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	SLC17A9	Q9BYT1	436 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	ANKZF1	Q9H8Y5	726 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	MRM3	Q9HC36	420 aa	Known RBP	7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	BPIFA1	Q9NP55	256 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	CHRAC1	Q9NRG0	131 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	PKD2L2	Q9NZM6	624 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	IL17C	Q9P0M4	197 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	MTRF1L	Q9UGC7	380 aa	Known RBP	7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	EIF2B4	Q9UI10	523 aa	Known RBP	7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	CD84	Q9UIB8	345 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	PKP3	Q9Y446	797 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	TCAF1	Q9Y4C2	921 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	PCDHGB2	Q9Y5G2	931 aa		7.3	□□□□□ -1.24
GARNL3-222	ENST00000498801	MAD1L1	Q9Y6D9	718 aa		7.3	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms