RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 SLCO2A1Q92959 643 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 MTERF3Q96E29 417 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 TRAF4Q9BUZ4 470 aaPredicted RBP3.12□□□□□ -1.91
SMC4-227ENST00000497984 ABHD6Q9BV23 337 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 PSD3Q9NYI0 1048 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 THEGQ9P2T0 379 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 NME7Q9Y5B8 376 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 ANGPTL3Q9Y5C1 460 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 PCDHGA5Q9Y5G8 931 aa3.12□□□□□ -1.91
SMC4-227ENST00000497984 ATRXP46100 2492 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 HCFC1P51610 2035 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 SRRM5B3KS81 715 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 PTGES3LE9PB15 166 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 ZNF195O14628 629 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 TO15178 435 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 PAPSS1O43252 624 aaPredicted RBP3.11□□□□□ -1.91
SMC4-227ENST00000497984 IDH3BO43837 385 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 PRKRAO75569 313 aaKnown RBP3.11□□□□□ -1.91
SMC4-227ENST00000497984 VPREB1P12018 145 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 MMP9P14780 707 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 MMP12P39900 470 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 HADHAP40939 763 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 MFAP4P55083 255 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 PAX8Q06710 450 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 CALCOCO2Q13137 446 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 IRF3Q14653 427 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 RAB41Q5JT25 222 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 WLSQ5T9L3 541 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 GRTP1Q5TC63 336 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 KRT79Q5XKE5 535 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 PTAR1Q7Z6K3 402 aaPredicted RBP3.11□□□□□ -1.91
SMC4-227ENST00000497984 HOGA1Q86XE5 327 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 C17orf47Q8NEP4 570 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 MOSPD2Q8NHP6 518 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 CENPTQ96BT3 561 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 FAM120BQ96EK7 910 aaKnown RBP3.11□□□□□ -1.91
SMC4-227ENST00000497984 NEK1Q96PY6 1258 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 SRSF8Q9BRL6 282 aaKnown RBP3.11□□□□□ -1.91
SMC4-227ENST00000497984 MAK16Q9BXY0 300 aaKnown RBP3.11□□□□□ -1.91
SMC4-227ENST00000497984 PITPNM3Q9BZ71 974 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 FTOQ9C0B1 505 aaKnown RBP eCLIP3.11□□□□□ -1.91
SMC4-227ENST00000497984 CHMP1AQ9HD42 196 aaPredicted RBP3.11□□□□□ -1.91
SMC4-227ENST00000497984 PANK4Q9NVE7 773 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 TAS2R14Q9NYV8 317 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 NPAP1Q9NZP6 1156 aa3.11□□□□□ -1.91
SMC4-227ENST00000497984 SUCLA2Q9P2R7 463 aaPredicted RBP3.11□□□□□ -1.91
SMC4-227ENST00000497984 AGAP14A8MT82 685 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 AP3D1O14617 1153 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 SSX4O60224 188 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 C22orf31O95567 290 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 CYP2A7P20853 494 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 SLC6A6P31641 620 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 SLC15A1P46059 708 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 SUOXP51687 545 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 CLNS1AP54105 237 aaKnown RBP3.1□□□□□ -1.91
SMC4-227ENST00000497984 PPP2R2BQ00005 443 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 PRKCZQ05513 592 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 PNRC1Q12796 327 aaPredicted RBP3.1□□□□□ -1.91
SMC4-227ENST00000497984 PLA2G7Q13093 441 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 LY6DQ14210 128 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 TAF13Q15543 124 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 DUSP28Q4G0W2 176 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 FAM98BQ52LJ0 330 aaKnown RBP3.1□□□□□ -1.91
SMC4-227ENST00000497984 KLHL26Q53HC5 615 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 ADGRA1Q86SQ6 560 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 CERS3Q8IU89 383 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 POM121L12Q8N7R1 296 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 Q8NBF4 154 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 ZNF519Q8TB69 540 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 ERLEC1Q96DZ1 483 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 SAT2Q96F10 170 aaPredicted RBP3.1□□□□□ -1.91
SMC4-227ENST00000497984 FAM81BQ96LP2 452 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 PRICKLE1Q96MT3 831 aaPredicted RBP3.1□□□□□ -1.91
SMC4-227ENST00000497984 CHCHD6Q9BRQ6 235 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 DGCR6LQ9BY27 220 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 SPATC1LQ9H0A9 340 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 PPIL3Q9H2H8 161 aaKnown RBP3.1□□□□□ -1.91
SMC4-227ENST00000497984 KCNK15Q9H427 330 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 OSGEPL1Q9H4B0 414 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 A4GALTQ9NPC4 353 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 SDR39U1Q9NRG7 319 aaPredicted RBP3.1□□□□□ -1.91
SMC4-227ENST00000497984 GPR83Q9NYM4 423 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 ZDHHC2Q9UIJ5 367 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 ZNF148Q9UQR1 794 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 GRIP1Q9Y3R0 1128 aa3.1□□□□□ -1.91
SMC4-227ENST00000497984 LOC100509620A0A075B734 347 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 PRSS51A0A1B0GVH4 220 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 B4DLN1 442 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 RNASEH1O60930 286 aaKnown RBP3.09□□□□□ -1.91
SMC4-227ENST00000497984 ITIH1P19827 911 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 CA6P23280 308 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 ACSL1P33121 698 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 LEPRP48357 1165 aaKnown RBP3.09□□□□□ -1.91
SMC4-227ENST00000497984 MRPL12P52815 198 aaKnown RBP3.09□□□□□ -1.91
SMC4-227ENST00000497984 KRTAP10-1P60331 282 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 KRT33BQ14525 404 aa3.09□□□□□ -1.91
SMC4-227ENST00000497984 FASTKD3Q14CZ7 662 aaKnown RBP3.09□□□□□ -1.91
SMC4-227ENST00000497984 DLG2Q15700 870 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms