RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CDC25BP30305 580 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 CSE1LP55060 971 aaKnown RBP11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 SNX1Q13596 522 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 OASLQ15646 514 aaKnown RBP11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 SLC5A12Q1EHB4 618 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 AARS2Q5JTZ9 985 aaKnown RBP11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 MLIPQ5VWP3 458 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 PAPD7Q5XG87 772 aaKnown RBP11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 TLDC1Q6P9B6 456 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 NAPRTQ6XQN6 538 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 TRIM73Q86UV7 250 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 SLC13A5Q86YT5 568 aaPredicted RBP11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 SPC24Q8NBT2 197 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 PPHLN1Q8NEY8 458 aaKnown RBP11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 CPT1CQ8TCG5 803 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 PROKR1Q8TCW9 393 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 ASZ1Q8WWH4 475 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 PEX13Q92968 403 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 SGSM3Q96HU1 749 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 FAM60AQ9NP50 221 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 RAB6BQ9NRW1 208 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 TXLNGQ9NUQ3 528 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 SPHK1Q9NYA1 384 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 PAK5Q9P286 719 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 SLC2A6Q9UGQ3 507 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 NDOR1Q9UHB4 597 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 GUCA1BQ9UMX6 200 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 SRPK3Q9UPE1 567 aa11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 TNRC6AQ8NDV7 1962 aaKnown RBP11.35□□□□□ -0.59
NUDCD3-211ENST00000497978 UBR5O95071 2799 aaPredicted RBP11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 CLEC18AA5D8T8 446 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 A6NL46 340 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 ZSCAN9O15535 394 aaPredicted RBP11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 CEACAM4O75871 244 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 IGHEP01854 428 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 APRTP07741 180 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 OTX2P32243 289 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 CCR7P32248 378 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 FOLR3P41439 243 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 RAB28P51157 221 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 DCDP81605 110 aaKnown RBP11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 ACVR1Q04771 509 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 SRSF1Q07955 248 aaKnown RBP eCLIP11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 HSPA14Q0VDF9 509 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 ATP1A4Q13733 1029 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 SSPNQ14714 243 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 TMED2Q15363 201 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 ZIC1Q15915 447 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 DEFB110Q30KQ9 67 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 NADK2Q4G0N4 442 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 C1orf189Q5VU69 101 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 FAM69BQ5VUD6 431 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 ZNF385CQ66K41 422 aaPredicted RBP11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 RHBDD2Q6NTF9 364 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 ADGRD1Q6QNK2 874 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 CLEC18BQ6UXF7 455 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 SLC22A15Q8IZD6 547 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 ZBTB2Q8N680 514 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 GLIS1Q8NBF1 620 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 CLEC18CQ8NCF0 446 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 GALNT11Q8NCW6 608 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 FDCSPQ8NFU4 85 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 GSDMBQ8TAX9 411 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 DENND1AQ8TEH3 1009 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 C1orf54Q8WWF1 131 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 SLC22A18Q96BI1 424 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 FER1L6-AS2Q96M78 137 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 NDC1Q9BTX1 674 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 CARD6Q9BX69 1037 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 AP1M1Q9BXS5 423 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 SPRTNQ9H040 489 aaPredicted RBP11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 CASS4Q9NQ75 786 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 CATSPERZQ9NTU4 200 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 GPR83Q9NYM4 423 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 IFT80Q9P2H3 777 aaPredicted RBP11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 PLAGL1Q9UM63 463 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 PLCL2Q9UPR0 1127 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 TCAF1Q9Y4C2 921 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 NBASA2RRP1 2371 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 DOPEY2Q9Y3R5 2298 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 SEC16AO15027 2179 aa11.34□□□□□ -0.59
NUDCD3-211ENST00000497978 MED13Q9UHV7 2174 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 AP3B1O00203 1094 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 PEX12O00623 359 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 KLHL41O60662 606 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 TPBGLP0DKB5 382 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 CBSLP0DN79 551 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 ETS1P14921 441 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 VARSP26640 1264 aaKnown RBP11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 PKLRP30613 574 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 CBSP35520 551 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 GRIA1P42261 906 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 TTPAP49638 278 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 RPS6KA1Q15418 735 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 KYNUQ16719 465 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 PCID2Q5JVF3 399 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 PTRHD1Q6GMV3 140 aaKnown RBP11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 TTC23LQ6PF05 361 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 UNC5DQ6UXZ4 953 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 C4orf22Q6V702 233 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms