RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, human

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-210	ENST00000497730	CDKN1A	P38936	164 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	MNDA	P41218	407 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	MAPK12	P53778	367 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	KRTAP24-1	Q3LI83	254 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	SYT14P1	Q58G82	188 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	KRBOX4	Q5JUW0	171 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	MFSD6	Q6ZSS7	791 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730		Q6ZTC4	211 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	OR11H4	Q8NGC9	324 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	ZNF653	Q96CK0	615 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	FBXO17	Q96EF6	278 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	BAG1	Q99933	345 aa	Predicted RBP	5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	NUP85	Q9BW27	656 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	LAT2	Q9GZY6	243 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	SIX2	Q9NPC8	291 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	TXLNG	Q9NUQ3	528 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	CACNG4	Q9UBN1	327 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	ZDHHC2	Q9UIJ5	367 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	RPS6KL1	Q9Y6S9	549 aa		5.21	□□□□□ -1.58
TRA2A-210	ENST00000497730	LOC101059948	A0A1B0GTJ6	334 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730		A0A1W2PPQ1	181 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730		A8MXE2	369 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	TCERG1	O14776	1098 aa	Known RBP	5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	PCDH7	O60245	1069 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	PRKRA	O75569	313 aa	Known RBP	5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	OR52Z1	P0C646	297 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	FRMD6-AS1	P0C7T7	363 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	HSPA8	P11142	646 aa	Known RBP	5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	CA4	P22748	312 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	AZGP1	P25311	298 aa	Known RBP	5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	CEACAM8	P31997	349 aa	Predicted RBP	5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	ZNF415	Q09FC8	603 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	TNIP1	Q15025	636 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	TAF13	Q15543	124 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	SH2D5	Q6ZV89	423 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	NUP54	Q7Z3B4	507 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	KLHDC8B	Q8IXV7	354 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	PI4KAP1	Q8N8J0	262 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	KBTBD8	Q8NFY9	601 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	DHX58	Q96C10	678 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	ZNF501	Q96CX3	271 aa	Predicted RBP	5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	THOC1	Q96FV9	657 aa	Known RBP	5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	URM1	Q9BTM9	101 aa	Known RBP	5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	AP1M1	Q9BXS5	423 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	ZNF701	Q9NV72	531 aa	Predicted RBP	5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	C2CD2	Q9Y426	696 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730	KIAA1210	Q9ULL0	1709 aa		5.2	□□□□□ -1.58
TRA2A-210	ENST00000497730		A0A1W2PN81	502 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	NEMP2	A6NFY4	417 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	ZNF197	O14709	1029 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	ATP6V0E1	O15342	81 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	C22orf31	O95567	290 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	NGF	P01138	241 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	IGHV2-70	P01814	119 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	AMBP	P02760	352 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	ERVK-10	P10266	1014 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	HAPLN1	P10915	354 aa	Predicted RBP	5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	ERCC2	P18074	760 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	CYP11B2	P19099	503 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	EFNA1	P20827	205 aa	Predicted RBP	5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	ACHE	P22303	614 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	HOXC8	P31273	242 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	CHRNA7	P36544	502 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	TUBB4B	P68371	445 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	MAT1A	Q00266	395 aa	Known RBP	5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	PRKCZ	Q05513	592 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	RBPJ	Q06330	500 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	ACSM1	Q08AH1	577 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	COG2	Q14746	738 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	CA9	Q16790	459 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	UGP2	Q16851	508 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	ITPRIPL2	Q3MIP1	535 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	KIAA1644	Q3SXP7	199 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	ARHGEF16	Q5VV41	709 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	PRR27	Q6MZM9	219 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	C11orf63	Q6NUN7	778 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	C15orf39	Q6ZRI6	1047 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	MAPKAPK5-AS1	Q8N8E1	139 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	ZNF558	Q96NG5	402 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	MIS12	Q9H081	205 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	SDR39U1	Q9NRG7	319 aa	Predicted RBP	5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	SPHK1	Q9NYA1	384 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	KCNJ14	Q9UNX9	436 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	TMED3	Q9Y3Q3	217 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	CCL27	Q9Y4X3	112 aa		5.19	□□□□□ -1.58
TRA2A-210	ENST00000497730	ANKRD61	A6NGH8	418 aa		5.18	□□□□□ -1.58
TRA2A-210	ENST00000497730	ACSL3	O95573	720 aa		5.18	□□□□□ -1.58
TRA2A-210	ENST00000497730	FYN	P06241	537 aa		5.18	□□□□□ -1.58
TRA2A-210	ENST00000497730	ATP5B	P06576	529 aa	Known RBP	5.18	□□□□□ -1.58
TRA2A-210	ENST00000497730	CD48	P09326	243 aa		5.18	□□□□□ -1.58
TRA2A-210	ENST00000497730	CCDC175	P0C221	793 aa		5.18	□□□□□ -1.58
TRA2A-210	ENST00000497730	PRSS56	P0CW18	603 aa		5.18	□□□□□ -1.58
TRA2A-210	ENST00000497730	EEF1B2	P24534	225 aa	Known RBP	5.18	□□□□□ -1.58
TRA2A-210	ENST00000497730	ITGA3	P26006	1051 aa		5.18	□□□□□ -1.58
TRA2A-210	ENST00000497730	CHRNB4	P30926	498 aa		5.18	□□□□□ -1.58
TRA2A-210	ENST00000497730	MAP2K2	P36507	400 aa		5.18	□□□□□ -1.58
TRA2A-210	ENST00000497730	B3GALT5-AS1	P59052	145 aa		5.18	□□□□□ -1.58
TRA2A-210	ENST00000497730	ZNF876P	Q49A33	203 aa		5.18	□□□□□ -1.58
TRA2A-210	ENST00000497730	SPDYC	Q5MJ68	293 aa		5.18	□□□□□ -1.58
TRA2A-210	ENST00000497730	CHST3	Q7LGC8	479 aa		5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms