RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 LANCL1O43813 399 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 HYAL3O43820 417 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-224ENST00000497488 B4GALT3O60512 393 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 ZNF217O75362 1048 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 TMCC1O94876 653 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 NPSP0C0P6 89 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 ANKRD34CP0C6C1 535 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 GALP22466 123 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 HOXD10P28358 340 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 OTX2P32243 289 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 GPR12P47775 334 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 SOX2P48431 317 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 DLK1P80370 383 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 PKP1Q13835 747 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 ARHGEF6Q15052 776 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 TCTE1Q5JU00 501 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 TMEM63BQ5T3F8 832 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 SIGIRRQ6IA17 410 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 TPRG1Q6ZUI0 275 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 WDR53Q7Z5U6 358 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-224ENST00000497488 RTN4RL2Q86UN3 420 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 TAX1BP1Q86VP1 789 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 CCDC25Q86WR0 208 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 ZSWIM9Q86XI8 627 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 ZNF761Q86XN6 746 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-224ENST00000497488 RNF148Q8N7C7 305 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 FAM46BQ96A09 425 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 ESAMQ96AP7 390 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 MOB3AQ96BX8 217 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 ERLEC1Q96DZ1 483 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 P2RY11Q96G91 374 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 PIWIL1Q96J94 861 aaKnown RBP5.89□□□□□ -1.47
BRCA1-224ENST00000497488 PBKQ96KB5 322 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 SECISBP2Q96T21 854 aaKnown RBP5.89□□□□□ -1.47
BRCA1-224ENST00000497488 PCDHB18PQ96TA0 734 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 CCT7Q99832 543 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 GPR87Q9BY21 358 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 CLSTN2Q9H4D0 955 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 RAD21L1Q9H4I0 556 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 YY1AP1Q9H869 796 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 GPR108Q9NPR9 543 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 HINT3Q9NQE9 182 aaKnown RBP5.89□□□□□ -1.47
BRCA1-224ENST00000497488 HOMER3Q9NSC5 361 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 FARSBQ9NSD9 589 aaKnown RBP5.89□□□□□ -1.47
BRCA1-224ENST00000497488 PANK4Q9NVE7 773 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 C6orf203Q9P0P8 240 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-224ENST00000497488 STK26Q9P289 416 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 ADAMTS5Q9UNA0 930 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 CHTOPQ9Y3Y2 248 aaKnown RBP5.89□□□□□ -1.47
BRCA1-224ENST00000497488 ROCK1Q13464 1354 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 TNRQ92752 1358 aa5.89□□□□□ -1.47
BRCA1-224ENST00000497488 A0A1B0GTL3 188 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 LINC00854A0A1B0GVQ3 168 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 SCO2A0A1W2PP80 73 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 A0A1W2PPW3 197 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 E9PBE3 544 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 TLX2O43763 284 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-224ENST00000497488 SSX4O60224 188 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 SURF6O75683 361 aaKnown RBP5.88□□□□□ -1.47
BRCA1-224ENST00000497488 CDKL5O76039 1030 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 LUC7L3O95232 432 aaKnown RBP5.88□□□□□ -1.47
BRCA1-224ENST00000497488 MT-CO3P00414 261 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 CALCBP10092 127 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 CYP2D6P10635 497 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 CCR1P32246 355 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 LHX1P48742 406 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 VCPP55072 806 aaKnown RBP5.88□□□□□ -1.47
BRCA1-224ENST00000497488 SLC25A3Q00325 362 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 CAP1Q01518 475 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 TNFRSF17Q02223 184 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 CFHR1Q03591 330 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 LDLRAP1Q5SW96 308 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 NSUN5P2Q63ZY6 315 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 ARMC6Q6NXE6 501 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 PRSS55Q6UWB4 352 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-224ENST00000497488 B3GLCTQ6Y288 498 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 DCDC5Q6ZRR9 648 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 MEPCEQ7L2J0 689 aaKnown RBP5.88□□□□□ -1.47
BRCA1-224ENST00000497488 BCDIN3DQ7Z5W3 292 aaKnown RBP5.88□□□□□ -1.47
BRCA1-224ENST00000497488 TFAP2DQ7Z6R9 452 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 DENND6AQ8IWF6 608 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 LRRC56Q8IYG6 542 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-224ENST00000497488 BBS5Q8N3I7 341 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 FAM47BQ8NA70 645 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 OR52B4Q8NGK2 314 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 OR52K1Q8NGK4 314 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 OR10T2Q8NGX3 314 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 LINGO1Q96FE5 620 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 SFXN2Q96NB2 322 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 ZNF570Q96NI8 536 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 PSKH2Q96QS6 385 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 SPAG8Q99932 426 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-224ENST00000497488 THAP2Q9H0W7 228 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 ZCCHC3Q9NUD5 404 aaKnown RBP5.88□□□□□ -1.47
BRCA1-224ENST00000497488 ANKRD10Q9NXR5 420 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 CNOT2Q9NZN8 540 aaKnown RBP5.88□□□□□ -1.47
BRCA1-224ENST00000497488 STK39Q9UEW8 545 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 ABT1Q9ULW3 272 aaKnown RBP5.88□□□□□ -1.47
BRCA1-224ENST00000497488 WNT6Q9Y6F9 365 aa5.88□□□□□ -1.47
BRCA1-224ENST00000497488 A2ML1A8K2U0 1454 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms