RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 HSPA14Q0VDF9 509 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 ATP1A4Q13733 1029 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 KIR2DS3Q14952 304 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 SLC5A12Q1EHB4 618 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 DNAJC21Q5F1R6 531 aaKnown RBP16.54■□□□□ 0.24
SMC4-226ENST00000497311 C1orf189Q5VU69 101 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 MLIPQ5VWP3 458 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 RHBDD2Q6NTF9 364 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 HPS6Q86YV9 775 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 GLIS1Q8NBF1 620 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 UBE2Q2Q8WVN8 375 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 C1orf54Q8WWF1 131 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 SGSM3Q96HU1 749 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 ZNF778Q96MU6 729 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 NUDT9Q9BW91 350 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 CASS4Q9NQ75 786 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 RAB6BQ9NRW1 208 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 IRAK4Q9NWZ3 460 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 ANAPC5Q9UJX4 755 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 TCAF1Q9Y4C2 921 aa16.54■□□□□ 0.24
SMC4-226ENST00000497311 ZSCAN9O15535 394 aaPredicted RBP16.53■□□□□ 0.24
SMC4-226ENST00000497311 KLF7O75840 302 aaPredicted RBP16.53■□□□□ 0.24
SMC4-226ENST00000497311 CD63P08962 238 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 OTX2P32243 289 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 CCR7P32248 378 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 DCDP81605 110 aaKnown RBP16.53■□□□□ 0.24
SMC4-226ENST00000497311 SSPNQ14714 243 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 AARS2Q5JTZ9 985 aaKnown RBP16.53■□□□□ 0.24
SMC4-226ENST00000497311 TLDC1Q6P9B6 456 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 ZNF534Q76KX8 674 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 SLC13A5Q86YT5 568 aaPredicted RBP16.53■□□□□ 0.24
SMC4-226ENST00000497311 SLC22A15Q8IZD6 547 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 ZNF655Q8N720 491 aaPredicted RBP16.53■□□□□ 0.24
SMC4-226ENST00000497311 CCDC89Q8N998 374 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 SPC24Q8NBT2 197 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 GALNT11Q8NCW6 608 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 PROKR1Q8TCW9 393 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 ASZ1Q8WWH4 475 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 PEX13Q92968 403 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 IP6K3Q96PC2 410 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 CARD6Q9BX69 1037 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 AP1M1Q9BXS5 423 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 TXLNGQ9NUQ3 528 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 GPR83Q9NYM4 423 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 PAK5Q9P286 719 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 IFT80Q9P2H3 777 aaPredicted RBP16.53■□□□□ 0.24
SMC4-226ENST00000497311 NDOR1Q9UHB4 597 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 GUCA1BQ9UMX6 200 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 SRPK3Q9UPE1 567 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 PLCL2Q9UPR0 1127 aa16.53■□□□□ 0.24
SMC4-226ENST00000497311 SNRNP200O75643 2136 aaKnown RBP16.52■□□□□ 0.24
SMC4-226ENST00000497311 FER1L5A0AVI2 2057 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 CCDC88CQ9P219 2028 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 SORBS2O94875 1100 aaKnown RBP16.52■□□□□ 0.24
SMC4-226ENST00000497311 RPN2P04844 631 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 APRTP07741 180 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 ATXN8OSP0DMR3 200 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 GP1BBP13224 206 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 ETS1P14921 441 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 PEBP1P30086 187 aaKnown RBP16.52■□□□□ 0.24
SMC4-226ENST00000497311 PKLRP30613 574 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 FOLR3P41439 243 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 RAB28P51157 221 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 SNX1Q13596 522 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 JMJD6Q6NYC1 403 aaPredicted RBP16.52■□□□□ 0.24
SMC4-226ENST00000497311 PRUNE1Q86TP1 453 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 VRK3Q8IV63 474 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 DNAJC22Q8N4W6 341 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 PPHLN1Q8NEY8 458 aaKnown RBP16.52■□□□□ 0.24
SMC4-226ENST00000497311 CFAP61Q8NHU2 1237 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 GBP5Q96PP8 586 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 TSGA10Q9BZW7 698 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 DHCR7Q9UBM7 475 aaKnown RBP16.52■□□□□ 0.24
SMC4-226ENST00000497311 PTRH2Q9Y3E5 179 aaKnown RBP16.52■□□□□ 0.24
SMC4-226ENST00000497311 MAP4K5Q9Y4K4 846 aa16.52■□□□□ 0.24
SMC4-226ENST00000497311 KRT86O43790 486 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 GPC4O75487 556 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 APOA4P06727 396 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 CTSBP07858 339 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 GNLYP22749 145 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 UQCRFS1P47985 274 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 SEMA3AQ14563 771 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 KYNUQ16719 465 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 MRGPREQ86SM8 312 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 SLC22A18Q96BI1 424 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 FER1L6-AS2Q96M78 137 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 SMAD5Q99717 465 aaKnown RBP16.51■□□□□ 0.23
SMC4-226ENST00000497311 NDC1Q9BTX1 674 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 MFRPQ9BY79 579 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 SLAMF7Q9NQ25 335 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 CHRAC1Q9NRG0 131 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 CATSPERZQ9NTU4 200 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 CDYLQ9Y232 598 aa16.51■□□□□ 0.23
SMC4-226ENST00000497311 USP9XQ93008 2570 aaPredicted RBP16.51■□□□□ 0.23
SMC4-226ENST00000497311 USP9YO00507 2555 aaPredicted RBP16.5■□□□□ 0.23
SMC4-226ENST00000497311 IQCF5A8MTL0 148 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 GOLGA6L6A8MZA4 724 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 PEX12O00623 359 aa16.5■□□□□ 0.23
SMC4-226ENST00000497311 PRMT5O14744 637 aaPredicted RBP16.5■□□□□ 0.23
SMC4-226ENST00000497311 IGHEP01854 428 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms