RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 KLHL7Q8IXQ5 586 aa11.8□□□□□ -0.52
HDLBP-246ENST00000496569 C17orf53Q8N3J3 647 aaPredicted RBP11.8□□□□□ -0.52
HDLBP-246ENST00000496569 NAT8LQ8N9F0 302 aa11.8□□□□□ -0.52
HDLBP-246ENST00000496569 C19orf47Q8N9M1 422 aaKnown RBP11.8□□□□□ -0.52
HDLBP-246ENST00000496569 SKA2Q8WVK7 121 aaPredicted RBP11.8□□□□□ -0.52
HDLBP-246ENST00000496569 MR1Q95460 341 aa11.8□□□□□ -0.52
HDLBP-246ENST00000496569 TRIM51Q9BSJ1 452 aa11.8□□□□□ -0.52
HDLBP-246ENST00000496569 TRIM4Q9C037 500 aa11.8□□□□□ -0.52
HDLBP-246ENST00000496569 CHST8Q9H2A9 424 aa11.8□□□□□ -0.52
HDLBP-246ENST00000496569 SAMD15Q9P1V8 674 aa11.8□□□□□ -0.52
HDLBP-246ENST00000496569 SLC17A6Q9P2U8 582 aa11.8□□□□□ -0.52
HDLBP-246ENST00000496569 MAD1L1Q9Y6D9 718 aa11.8□□□□□ -0.52
HDLBP-246ENST00000496569 NUP210LQ5VU65 1888 aa11.8□□□□□ -0.52
HDLBP-246ENST00000496569 A0A0J9YY10 115 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 ZCWPW2A0A1B0GU75 182 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 MATN2O00339 956 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 NRP2O60462 931 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 CPNE3O75131 537 aaKnown RBP11.79□□□□□ -0.52
HDLBP-246ENST00000496569 MAGP20916 626 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 RPS3P23396 243 aaKnown RBP eCLIP11.79□□□□□ -0.52
HDLBP-246ENST00000496569 PPARGP37231 505 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-246ENST00000496569 PTGIRP43119 386 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 MAGEA3P43357 314 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 GABRA4P48169 554 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 FNTAP49354 379 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 POLE2P56282 527 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 GNG11P61952 73 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 MRPS25P82663 173 aaKnown RBP11.79□□□□□ -0.52
HDLBP-246ENST00000496569 MPP1Q00013 466 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 CHAF1BQ13112 559 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 CTBP1Q13363 440 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 IL10RAQ13651 578 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 TMED2Q15363 201 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 PPP1R7Q15435 360 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 KYNUQ16719 465 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 MSS51Q4VC12 460 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 DNAJC21Q5F1R6 531 aaKnown RBP11.79□□□□□ -0.52
HDLBP-246ENST00000496569 ACSBG2Q5FVE4 666 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 RNASEH2BQ5TBB1 312 aaKnown RBP11.79□□□□□ -0.52
HDLBP-246ENST00000496569 MRNIPQ6NTE8 343 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 NEPROQ6NW34 567 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 BORAQ6PGQ7 559 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 PTRH1Q86Y79 214 aaKnown RBP11.79□□□□□ -0.52
HDLBP-246ENST00000496569 DCUN1D3Q8IWE4 304 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 GIMAP7Q8NHV1 300 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 ASZ1Q8WWH4 475 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 SIGLEC10Q96LC7 697 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 NAP1L3Q99457 506 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-246ENST00000496569 SPRTNQ9H040 489 aaPredicted RBP11.79□□□□□ -0.52
HDLBP-246ENST00000496569 ACTL8Q9H568 366 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 ASIC3Q9UHC3 531 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 PADI1Q9ULC6 663 aa11.79□□□□□ -0.52
HDLBP-246ENST00000496569 GOLGA6L10A0A0M3HER8 536 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 FAM237BA0A1B0GVD1 139 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 K7EM74 188 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 AP3B1O00203 1094 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 DNALI1O14645 258 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-246ENST00000496569 DNAJB5O75953 348 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 SLCO2B1O94956 709 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 CCNYL3P0C7X3 344 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 OGNP20774 298 aaKnown RBP11.78□□□□□ -0.52
HDLBP-246ENST00000496569 CYP2A7P20853 494 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 SLC1A2P43004 574 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 RAB28P51157 221 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 YBX1P67809 324 aaKnown RBP11.78□□□□□ -0.52
HDLBP-246ENST00000496569 SARNPP82979 210 aaKnown RBP11.78□□□□□ -0.52
HDLBP-246ENST00000496569 CUL1Q13616 776 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 SLC9A5Q14940 896 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 HP1BP3Q5SSJ5 553 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-246ENST00000496569 PLEKHS1Q5SXH7 462 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 C1orf189Q5VU69 101 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 IZUMO3Q5VZ72 239 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 CPZQ66K79 652 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 ZNF549Q6P9A3 640 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 FAM198BQ6UWH4 519 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 OTOAQ7RTW8 1153 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 PRICKLE2Q7Z3G6 844 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 ZNF605Q86T29 641 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 HOOK3Q86VS8 718 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 CILP2Q8IUL8 1156 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 IGDCC3Q8IVU1 814 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 MCUQ8NE86 351 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 DENND1AQ8TEH3 1009 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 CLIP3Q96DZ5 547 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 PANX3Q96QZ0 392 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 TSSK1BQ9BXA7 367 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 TWSG1Q9GZX9 223 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 ACTR5Q9H9F9 607 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-246ENST00000496569 FANCEQ9HB96 536 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 XAB2Q9HCS7 855 aaKnown RBP11.78□□□□□ -0.52
HDLBP-246ENST00000496569 ZNF71Q9NQZ8 489 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-246ENST00000496569 C20orf96Q9NUD7 363 aaPredicted RBP11.78□□□□□ -0.52
HDLBP-246ENST00000496569 PCMTD2Q9NV79 361 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 POLG2Q9UHN1 485 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 DOCK10Q96BY6 2186 aa11.78□□□□□ -0.52
HDLBP-246ENST00000496569 SPENQ96T58 3664 aaKnown RBP11.77□□□□□ -0.53
HDLBP-246ENST00000496569 CTAGE9A4FU28 777 aa11.77□□□□□ -0.53
HDLBP-246ENST00000496569 SDR42E2A6NKP2 422 aa11.77□□□□□ -0.53
HDLBP-246ENST00000496569 B8ZZF3 427 aa11.77□□□□□ -0.53
HDLBP-246ENST00000496569 F8W8V4 182 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms