RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 EPHA4P54764 986 aa21.14■□□□□ 0.97
C9orf3-222ENST00000496567 OR4D1Q15615 310 aa21.14■□□□□ 0.97
C9orf3-222ENST00000496567 PHKG1Q16816 387 aa21.14■□□□□ 0.97
C9orf3-222ENST00000496567 AGBL2Q5U5Z8 902 aa21.14■□□□□ 0.97
C9orf3-222ENST00000496567 GUSBP11Q6P575 273 aa21.14■□□□□ 0.97
C9orf3-222ENST00000496567 APOPT1Q96IL0 206 aa21.14■□□□□ 0.97
C9orf3-222ENST00000496567 CCDC138Q96M89 665 aa21.14■□□□□ 0.97
C9orf3-222ENST00000496567 SH3GL2Q99962 352 aa21.14■□□□□ 0.97
C9orf3-222ENST00000496567 IQCGQ9H095 443 aaKnown RBP21.14■□□□□ 0.97
C9orf3-222ENST00000496567 ARL15Q9NXU5 204 aa21.14■□□□□ 0.97
C9orf3-222ENST00000496567 SPATA7Q9P0W8 599 aa21.14■□□□□ 0.97
C9orf3-222ENST00000496567 LNPEPQ9UIQ6 1025 aa21.14■□□□□ 0.97
C9orf3-222ENST00000496567 GOLGA4Q13439 2230 aaKnown RBP21.13■□□□□ 0.97
C9orf3-222ENST00000496567 ACP1P24666 158 aa21.13■□□□□ 0.97
C9orf3-222ENST00000496567 SHMT2P34897 504 aa21.13■□□□□ 0.97
C9orf3-222ENST00000496567 HSD17B2P37059 387 aa21.13■□□□□ 0.97
C9orf3-222ENST00000496567 CDKL1Q00532 357 aa21.13■□□□□ 0.97
C9orf3-222ENST00000496567 GRB7Q14451 532 aa21.13■□□□□ 0.97
C9orf3-222ENST00000496567 CCSMST1Q4G0I0 132 aa21.13■□□□□ 0.97
C9orf3-222ENST00000496567 TECRLQ5HYJ1 363 aa21.13■□□□□ 0.97
C9orf3-222ENST00000496567 EFL1Q7Z2Z2 1120 aaKnown RBP21.13■□□□□ 0.97
C9orf3-222ENST00000496567 EXOC3L1Q86VI1 746 aa21.13■□□□□ 0.97
C9orf3-222ENST00000496567 BANPQ8N9N5 519 aa21.13■□□□□ 0.97
C9orf3-222ENST00000496567 IFI44Q8TCB0 444 aa21.13■□□□□ 0.97
C9orf3-222ENST00000496567 CCDC74AQ96AQ1 378 aa21.13■□□□□ 0.97
C9orf3-222ENST00000496567 MRPL57Q9BQC6 102 aaKnown RBP21.13■□□□□ 0.97
C9orf3-222ENST00000496567 MRPL46Q9H2W6 279 aaKnown RBP21.13■□□□□ 0.97
C9orf3-222ENST00000496567 KCNK4Q9NYG8 393 aa21.13■□□□□ 0.97
C9orf3-222ENST00000496567 UTP6Q9NYH9 597 aaKnown RBP21.13■□□□□ 0.97
C9orf3-222ENST00000496567 FAM221BA6H8Z2 402 aa21.12■□□□□ 0.97
C9orf3-222ENST00000496567 ZNF839A8K0R7 811 aa21.12■□□□□ 0.97
C9orf3-222ENST00000496567 ALDH4A1P30038 563 aa21.12■□□□□ 0.97
C9orf3-222ENST00000496567 RAB28P51157 221 aa21.12■□□□□ 0.97
C9orf3-222ENST00000496567 ARHGAP19Q14CB8 494 aa21.12■□□□□ 0.97
C9orf3-222ENST00000496567 TGFBIQ15582 683 aa21.12■□□□□ 0.97
C9orf3-222ENST00000496567 KLHL35Q6PF15 583 aa21.12■□□□□ 0.97
C9orf3-222ENST00000496567 ZNF761Q86XN6 746 aaPredicted RBP21.12■□□□□ 0.97
C9orf3-222ENST00000496567 FAM122AQ96E09 287 aa21.12■□□□□ 0.97
C9orf3-222ENST00000496567 ATOH8Q96SQ7 321 aa21.12■□□□□ 0.97
C9orf3-222ENST00000496567 PKP4Q99569 1192 aa21.12■□□□□ 0.97
C9orf3-222ENST00000496567 TBC1D10AQ9BXI6 508 aa21.12■□□□□ 0.97
C9orf3-222ENST00000496567 SRMSQ9H3Y6 488 aa21.12■□□□□ 0.97
C9orf3-222ENST00000496567 EPB41L1Q9H4G0 881 aa21.12■□□□□ 0.97
C9orf3-222ENST00000496567 SSU72Q9NP77 194 aaKnown RBP21.12■□□□□ 0.97
C9orf3-222ENST00000496567 TMEM216Q9P0N5 145 aa21.12■□□□□ 0.97
C9orf3-222ENST00000496567 GVINP1Q7Z2Y8 2422 aa21.12■□□□□ 0.97
C9orf3-222ENST00000496567 S100BP04271 92 aaPredicted RBP21.11■□□□□ 0.97
C9orf3-222ENST00000496567 GP1BAP07359 652 aa21.11■□□□□ 0.97
C9orf3-222ENST00000496567 ANXA5P08758 320 aa21.11■□□□□ 0.97
C9orf3-222ENST00000496567 TPBGLP0DKB5 382 aa21.11■□□□□ 0.97
C9orf3-222ENST00000496567 GPLD1P80108 840 aa21.11■□□□□ 0.97
C9orf3-222ENST00000496567 CCDC153Q494R4 210 aa21.11■□□□□ 0.97
C9orf3-222ENST00000496567 CDKL4Q5MAI5 379 aa21.11■□□□□ 0.97
C9orf3-222ENST00000496567 N4BP2L1Q5TBK1 243 aaPredicted RBP21.11■□□□□ 0.97
C9orf3-222ENST00000496567 AMIGO1Q86WK6 493 aa21.11■□□□□ 0.97
C9orf3-222ENST00000496567 OR4E2Q8NGC2 313 aa21.11■□□□□ 0.97
C9orf3-222ENST00000496567 ATL1Q8WXF7 558 aa21.11■□□□□ 0.97
C9orf3-222ENST00000496567 EGFL8Q99944 293 aa21.11■□□□□ 0.97
C9orf3-222ENST00000496567 OR6C2Q9NZP2 312 aa21.11■□□□□ 0.97
C9orf3-222ENST00000496567 XPR1Q9UBH6 696 aa21.11■□□□□ 0.97
C9orf3-222ENST00000496567 CIDEBQ9UHD4 219 aa21.11■□□□□ 0.97
C9orf3-222ENST00000496567 PLAGL1Q9UM63 463 aa21.11■□□□□ 0.97
C9orf3-222ENST00000496567 ICKQ9UPZ9 632 aa21.11■□□□□ 0.97
C9orf3-222ENST00000496567 SLC30A4O14863 429 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 UBXN7O94888 489 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 GUCA1CO95843 209 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 CSRP1P21291 193 aaKnown RBP21.1■□□□□ 0.97
C9orf3-222ENST00000496567 PKLRP30613 574 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 KCNC1P48547 511 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 PERM1Q5SV97 790 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 ANKS6Q68DC2 871 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 CDHR3Q6ZTQ4 885 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 OR10G6Q8NH81 332 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 TLCD1Q96CP7 247 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 AHCYL2Q96HN2 611 aaKnown RBP21.1■□□□□ 0.97
C9orf3-222ENST00000496567 CCDC3Q9BQI4 270 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 MENTQ9BUN1 341 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 NUDT4Q9NZJ9 180 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 CD274Q9NZQ7 290 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 CDV3Q9UKY7 258 aaKnown RBP21.1■□□□□ 0.97
C9orf3-222ENST00000496567 SUPT3HB4E1H0 165 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 SPAG7O75391 227 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 SUPT3HO75486 399 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 SLC16A8O95907 504 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 AMD1P17707 334 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 HNMTP50135 292 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 OR1D5P58170 312 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 TRIP6Q15654 476 aaKnown RBP21.1■□□□□ 0.97
C9orf3-222ENST00000496567 CYP2A13Q16696 494 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 C16orf46Q6P387 395 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 SPRED1Q7Z699 444 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 GLRX5Q86SX6 157 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 Q8N9G6 341 aaPredicted RBP21.1■□□□□ 0.97
C9orf3-222ENST00000496567 OR2L8Q8NGY9 312 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 JPH3Q8WXH2 748 aaPredicted RBP21.1■□□□□ 0.97
C9orf3-222ENST00000496567 EXT2Q93063 718 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 ARL8AQ96BM9 186 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 FBXL8Q96CD0 374 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 ATP6V1G3Q96LB4 118 aa21.1■□□□□ 0.97
C9orf3-222ENST00000496567 XKR8Q9H6D3 395 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms