RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 CCR7P32248 378 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 ETV3P41162 512 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 HALP42357 657 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 GNPDA1P46926 289 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 SLC7A2P52569 658 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 FOXA1P55317 472 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 ERVPABLB-1P60509 514 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 RPL38P63173 70 aaKnown RBP6.76□□□□□ -1.33
USP39-219ENST00000496047 MRPS22P82650 360 aaKnown RBP6.76□□□□□ -1.33
USP39-219ENST00000496047 KLC1Q07866 573 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 TRAF3Q13114 568 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 RUNX3Q13761 415 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 CAMK1Q14012 370 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 CCNIQ14094 377 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 LRP8Q14114 963 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 RCAN2Q14206 197 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 GBX1Q14549 363 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 ZNF234Q14588 700 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 TRIP10Q15642 601 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 ZNF423Q2M1K9 1284 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 FBXO48Q5FWF7 155 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 TCEAL5Q5H9L2 206 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 LRRC73Q5JTD7 316 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 FAM78AQ5JUQ0 283 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 C6orf136Q5SQH8 315 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 ATAT1Q5SQI0 421 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 C10orf62Q5T681 223 aaPredicted RBP6.76□□□□□ -1.33
USP39-219ENST00000496047 IRAK1BP1Q5VVH5 260 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 LIPJQ5W064 366 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 SDE2Q6IQ49 451 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 IRGCQ6NXR0 463 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 LETMD1Q6P1Q0 360 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 PAOXQ6QHF9 649 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 IZUMO2Q6UXV1 221 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 LIPIQ6XZB0 460 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 Q6ZVL8 140 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 MTSS1LQ765P7 747 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 HSD11B1LQ7Z5J1 315 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 ADGRD2Q7Z7M1 963 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 GPR149Q86SP6 731 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 DHFR2Q86XF0 187 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 ETFBKMTQ8IXQ9 262 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 PQLC1Q8N2U9 271 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 PHC3Q8NDX5 983 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 OR52B6Q8NGF0 335 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 MAFAQ8NHW3 353 aaPredicted RBP6.76□□□□□ -1.33
USP39-219ENST00000496047 CSGALNACT1Q8TDX6 532 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 GDPD5Q8WTR4 605 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 SELENOMQ8WWX9 145 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 PYDC1Q8WXC3 89 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 N4BP2L2Q92802 583 aaPredicted RBP6.76□□□□□ -1.33
USP39-219ENST00000496047 FGF13Q92913 245 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 COL26A1Q96A83 441 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 FBXL8Q96CD0 374 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 C3orf30Q96M34 536 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 CCDC138Q96M89 665 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 ZSWIM3Q96MP5 696 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 GDF15Q99988 308 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 TMEM79Q9BSE2 394 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 RIOK2Q9BVS4 552 aaKnown RBP6.76□□□□□ -1.33
USP39-219ENST00000496047 C1QTNF7Q9BXJ2 289 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 DPY30Q9C005 99 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 ABCG8Q9H221 673 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 RMND5AQ9H871 391 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 LRTM1Q9HBL6 345 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 TNFRSF12AQ9NP84 129 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 ASIC5Q9NY37 505 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 IKZF3Q9UKT9 509 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 ZNF490Q9ULM2 529 aaPredicted RBP6.76□□□□□ -1.33
USP39-219ENST00000496047 DYRK1BQ9Y463 629 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 DTNAQ9Y4J8 743 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 LRRC42Q9Y546 428 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 PCDHGA7Q9Y5G6 932 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 GPR45Q9Y5Y3 372 aa6.76□□□□□ -1.33
USP39-219ENST00000496047 OR2AG2A6NM03 316 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 AQP12BA6NM10 295 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 OR7A17O14581 309 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 LSM1O15116 133 aaKnown RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 PEX1O43933 1283 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 KDM1AO60341 852 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 SEC22BO75396 215 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 IL6P05231 212 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 EPHX1P07099 455 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 CTSLP07711 333 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 HSD3B1P14060 373 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 SLC2A4P14672 509 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 MYOGP15173 224 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 ARSAP15289 507 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 ACPPP15309 386 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 HOXB6P17509 224 aaKnown RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 DDX5P17844 614 aaKnown RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 PSMC3P17980 439 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 XRCC1P18887 633 aaPredicted RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 TCN1P20061 433 aaPredicted RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 IL10P22301 178 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 JAK1P23458 1154 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 HSD3B2P26439 372 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 PBLDP30039 288 aaPredicted RBP6.75□□□□□ -1.33
USP39-219ENST00000496047 GGT5P36269 586 aa6.75□□□□□ -1.33
USP39-219ENST00000496047 HNF4AP41235 474 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms