RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	PITPNM3	Q9BZ71	974 aa		11.99	□□□□□ -0.49
MRPL55-233	ENST00000495899	RAB17	Q9H0T7	212 aa		11.99	□□□□□ -0.49
MRPL55-233	ENST00000495899	PDE7B	Q9NP56	450 aa		11.99	□□□□□ -0.49
MRPL55-233	ENST00000495899	ICK	Q9UPZ9	632 aa		11.99	□□□□□ -0.49
MRPL55-233	ENST00000495899	TDRKH	Q9Y2W6	561 aa	Known RBP	11.99	□□□□□ -0.49
MRPL55-233	ENST00000495899	UTP11	Q9Y3A2	253 aa	Known RBP	11.99	□□□□□ -0.49
MRPL55-233	ENST00000495899	URB1	O60287	2271 aa	Known RBP	11.99	□□□□□ -0.49
MRPL55-233	ENST00000495899	PIPSL	A2A3N6	862 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	GSAP	A4D1B5	854 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	BANF1	O75531	89 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	URI1	O94763	535 aa	Predicted RBP	11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	HAUS5	O94927	633 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	MATN4	O95460	622 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	F12	P00748	615 aa	Predicted RBP	11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	MSL3P1	P0C860	447 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	ERVK-10	P10266	1014 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	MAP4	P27816	1152 aa	Known RBP	11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	SKIV2L2	P42285	1042 aa	Known RBP	11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	ATP1A2	P50993	1020 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	RAB28	P51157	221 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	CLCN7	P51798	805 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	SH3BP2	P78314	561 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	FOXM1	Q08050	763 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	C2orf54	Q08AI8	447 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	KIR2DS3	Q14952	304 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	KYNU	Q16719	465 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	WHAMMP3	Q1A5X7	153 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	TTLL9	Q3SXZ7	439 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	STEAP4	Q687X5	459 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	ZNF549	Q6P9A3	640 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	NEK10	Q6ZWH5	1172 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	PPP1R3B	Q86XI6	285 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	UNC5B	Q8IZJ1	945 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	OR8K5	Q8NH50	307 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	SNRNP27	Q8WVK2	155 aa	Known RBP	11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	PMEPA1	Q969W9	287 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	RAD51AP1	Q96B01	352 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	SLC22A18	Q96BI1	424 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	TRIM44	Q96DX7	344 aa	Predicted RBP	11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	CERS2	Q96G23	380 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	PWWP2A	Q96N64	755 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	CTRC	Q99895	268 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	RAB11FIP5	Q9BXF6	653 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	PRORY	Q9H606	182 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	XKR8	Q9H6D3	395 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	SYTL2	Q9HCH5	934 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	FBXO6	Q9NRD1	293 aa	Predicted RBP	11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	IARS2	Q9NSE4	1012 aa	Known RBP	11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	ACTR10	Q9NZ32	417 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	PILRA	Q9UKJ1	303 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	BTRC	Q9Y297	605 aa		11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.98	□□□□□ -0.49
MRPL55-233	ENST00000495899	SLC9B1P1	A6NJY1	282 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	EIF3F	O00303	357 aa	Predicted RBP	11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	EIF3H	O15372	352 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	C1orf105	O95561	183 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	CHRM5	P08912	532 aa	Predicted RBP	11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	CBSL	P0DN79	551 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	ENO3	P13929	434 aa	Predicted RBP	11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	FOLR1	P15328	257 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	CD9	P21926	228 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	CDH3	P22223	829 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	CBS	P35520	551 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	CARS	P49589	748 aa	Known RBP	11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	TUBB4B	P68371	445 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	VAC14	Q08AM6	782 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	PDIA2	Q13087	525 aa	Known RBP	11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	TUBB3	Q13509	450 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	MAP7	Q14244	749 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	GRB7	Q14451	532 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	TGIF1	Q15583	401 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	TEDDM1	Q5T9Z0	273 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	UGT3A1	Q6NUS8	523 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	CNST	Q6PJW8	725 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	SPESP1	Q6UW49	350 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	CCDC81	Q6ZN84	652 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	RAB42	Q8N4Z0	105 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	CFAP61	Q8NHU2	1237 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	SKA2	Q8WVK7	121 aa	Predicted RBP	11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	INPP5D	Q92835	1189 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	NKD1	Q969G9	470 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	OR2A14	Q96R47	310 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	MENT	Q9BUN1	341 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	PHACTR1	Q9C0D0	580 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	CHRNA10	Q9GZZ6	450 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	PLAC1	Q9HBJ0	212 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	APMAP	Q9HDC9	416 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	PPAN	Q9NQ55	473 aa	Known RBP	11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	FGF21	Q9NSA1	209 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	GRHL1	Q9NZI5	618 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	GALP	Q9UBC7	116 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	RARRES3	Q9UL19	164 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	CHMP2B	Q9UQN3	213 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	MED16	Q9Y2X0	877 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	DHRS7	Q9Y394	339 aa		11.97	□□□□□ -0.49
MRPL55-233	ENST00000495899	CELSR3	Q9NYQ7	3312 aa		11.96	□□□□□ -0.49
MRPL55-233	ENST00000495899	NBEA	Q8NFP9	2946 aa		11.96	□□□□□ -0.49
MRPL55-233	ENST00000495899	POM121C	A8CG34	1229 aa		11.96	□□□□□ -0.49
MRPL55-233	ENST00000495899	RASGRF2	O14827	1237 aa		11.96	□□□□□ -0.49
MRPL55-233	ENST00000495899	VPS26A	O75436	327 aa		11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms