RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	GRK6	P43250	576 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	DUSP3	P51452	185 aa	Predicted RBP	13.17	□□□□□ -0.3
APTX-231	ENST00000494973	HHEX	Q03014	270 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	NAA25	Q14CX7	972 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	PLCL1	Q15111	1095 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	SHB	Q15464	509 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	PHKG1	Q16816	387 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	DEFB133	Q30KQ1	61 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.17	□□□□□ -0.3
APTX-231	ENST00000494973	ATG16L1	Q676U5	607 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	TAX1BP1	Q86VP1	789 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	C17orf82	Q86X59	251 aa	Predicted RBP	13.17	□□□□□ -0.3
APTX-231	ENST00000494973	NUDCD3	Q8IVD9	361 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	NAGS	Q8N159	534 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	FAM181A	Q8N9Y4	354 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	OR5AR1	Q8NGP9	310 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	SLC37A2	Q8TED4	501 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	NAT6	Q93015	286 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	SLC22A18	Q96BI1	424 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	PAIP2	Q9BPZ3	127 aa	Known RBP	13.17	□□□□□ -0.3
APTX-231	ENST00000494973	HGH1	Q9BTY7	390 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	TRMO	Q9BU70	441 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	UNK	Q9C0B0	810 aa	Known RBP	13.17	□□□□□ -0.3
APTX-231	ENST00000494973	OXSM	Q9NWU1	459 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	FAM53C	Q9NYF3	392 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	UTP6	Q9NYH9	597 aa	Known RBP	13.17	□□□□□ -0.3
APTX-231	ENST00000494973	OR6C2	Q9NZP2	312 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	TDRKH	Q9Y2W6	561 aa	Known RBP	13.17	□□□□□ -0.3
APTX-231	ENST00000494973	RALGAPA1	Q6GYQ0	2036 aa		13.17	□□□□□ -0.3
APTX-231	ENST00000494973	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.16	□□□□□ -0.3
APTX-231	ENST00000494973	LNP1	A1A4G5	178 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	LILRA5	A6NI73	299 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973		A8MT66	165 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	NUDT21	O43809	227 aa	Known RBP	13.16	□□□□□ -0.3
APTX-231	ENST00000494973	KATNA1	O75449	491 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	FKBP9	O95302	570 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	GUCA1C	O95843	209 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	ERG	P11308	486 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	MTHFD2	P13995	350 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	GGT5	P36269	586 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	GMPR	P36959	345 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	SLC19A1	P41440	591 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	EPHA4	P54764	986 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	HERVK_113	P63132	956 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	PCLAF	Q15004	111 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
APTX-231	ENST00000494973	NR0B2	Q15466	257 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	TCEA2	Q15560	299 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	PFKFB4	Q16877	469 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	CFAP157	Q5JU67	520 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	PRAMEF14	Q5SWL7	426 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	CAPN13	Q6MZZ7	669 aa	Predicted RBP	13.16	□□□□□ -0.3
APTX-231	ENST00000494973	KANSL1	Q7Z3B3	1105 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	KLHDC8A	Q8IYD2	350 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	SYTL1	Q8IYJ3	562 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	SLC25A45	Q8N413	288 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	TMEM151A	Q8N4L1	468 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.16	□□□□□ -0.3
APTX-231	ENST00000494973	GPR156	Q8NFN8	814 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	HMGCLL1	Q8TB92	370 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	MGARP	Q8TDB4	240 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	PPP4R1	Q8TF05	950 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	SMPDL3A	Q92484	453 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	DLG3	Q92796	817 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	RHBDF1	Q96CC6	855 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	L3HYPDH	Q96EM0	354 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	MAGEB10	Q96LZ2	347 aa	Predicted RBP	13.16	□□□□□ -0.3
APTX-231	ENST00000494973	CAMK1G	Q96NX5	476 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	PKP4	Q99569	1192 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	MIPEP	Q99797	713 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	EDEM2	Q9BV94	578 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	C1QTNF3	Q9BXJ4	246 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	ERVK-6	Q9BXR3	956 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	CAPS2	Q9BXY5	557 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	SLC40A1	Q9NP59	571 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	TMEM9B	Q9NQ34	198 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	SEMA4G	Q9NTN9	838 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	UCKL1	Q9NWZ5	548 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.16	□□□□□ -0.3
APTX-231	ENST00000494973	STOX2	Q9P2F5	926 aa	Predicted RBP	13.16	□□□□□ -0.3
APTX-231	ENST00000494973	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.16	□□□□□ -0.3
APTX-231	ENST00000494973	PTBP2	Q9UKA9	531 aa	Known RBP	13.16	□□□□□ -0.3
APTX-231	ENST00000494973	IKZF3	Q9UKT9	509 aa		13.16	□□□□□ -0.3
APTX-231	ENST00000494973	CFAP20	Q9Y6A4	193 aa	Known RBP	13.16	□□□□□ -0.3
APTX-231	ENST00000494973	CABIN1	Q9Y6J0	2220 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	NCF1B	A6NI72	391 aa	Predicted RBP	13.15	□□□□□ -0.3
APTX-231	ENST00000494973	RHPN2P1	A8MT19	583 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	NCF1C	A8MVU1	366 aa	Predicted RBP	13.15	□□□□□ -0.3
APTX-231	ENST00000494973	TMEM114	B3SHH9	223 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973		G3V2L1	256 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	KLF11	O14901	512 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	GIPC1	O14908	333 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	NOBOX	O60393	691 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	DLX3	O60479	287 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	STK16	O75716	305 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	CCNDBP1	O95273	360 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	SLC16A8	O95907	504 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	SERPINE1	P05121	402 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	SBK3	P0C264	359 aa		13.15	□□□□□ -0.3
APTX-231	ENST00000494973	NCF1	P14598	390 aa	Predicted RBP	13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms