RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	OSGIN2	Q9Y236	505 aa		4.57	□□□□□ -1.68
CCDC66-222	ENST00000494672	ASB3	Q9Y575	518 aa		4.57	□□□□□ -1.68
CCDC66-222	ENST00000494672	CACNG2	Q9Y698	323 aa		4.57	□□□□□ -1.68
CCDC66-222	ENST00000494672	KIF24	Q5T7B8	1368 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	PGPEP1L	A6NFU8	196 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	SRRM3	A6NNA2	597 aa	Predicted RBP	4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	LGALS16	A8MUM7	142 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	SLCO1B7	G3V0H7	640 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672		H0YIN7	160 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	HIP1	O00291	1037 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	SYN3	O14994	580 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	CASC3	O15234	703 aa	Known RBP	4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	GRID2	O43424	1007 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	TRAPPC3	O43617	180 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	MGRN1	O60291	552 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	ECE2	O60344	883 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	SERPINI2	O75830	405 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	CRYZL1	O95825	349 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	LINGO3	P0C6S8	592 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	H2AFX	P16104	143 aa	Predicted RBP	4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	SERPINA4	P29622	427 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	IFNA8	P32881	189 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	NUP62	P37198	522 aa	Predicted RBP	4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	SLC26A3	P40879	764 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	KRT6C	P48668	564 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	DHPS	P49366	369 aa	Predicted RBP	4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	YWHAZ	P63104	245 aa	Known RBP	4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	MRPS25	P82663	173 aa	Known RBP	4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	TNFAIP2	Q03169	654 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	BFSP1	Q12934	665 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	CUL4A	Q13619	759 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	ZMYND11	Q15326	602 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	PFKFB4	Q16877	469 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	C2orf76	Q3KRA6	126 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	GALNTL6	Q49A17	601 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	SYTL3	Q4VX76	610 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	TOR1AIP1	Q5JTV8	583 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	TTC22	Q5TAA0	569 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	ATG9B	Q674R7	924 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	KLHL17	Q6TDP4	642 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	ZNF852	Q6ZMS4	543 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	ZNF329	Q86UD4	541 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	WDR5B	Q86VZ2	330 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	LRRC6	Q86X45	466 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	ERICH1	Q86X53	443 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	SCN4B	Q8IWT1	228 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	TRPV1	Q8NER1	839 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	CFAP61	Q8NHU2	1237 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	ZNF461	Q8TAF7	563 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	FANK1	Q8TC84	345 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	C2CD4C	Q8TF44	421 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	SCFD1	Q8WVM8	642 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	PTP4A1	Q93096	173 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	C3orf49	Q96BT1	292 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	FAM111A	Q96PZ2	611 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	TESK2	Q96S53	571 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	FIZ1	Q96SL8	496 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	ATP6V0B	Q99437	205 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	NDN	Q99608	321 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	SLC25A33	Q9BSK2	321 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	SPX	Q9BT56	116 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	CALN1	Q9BXU9	219 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	TRIM15	Q9C019	465 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	TMEM206	Q9H813	350 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	SEPSECS	Q9HD40	501 aa	Known RBP	4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	ITM2C	Q9NQX7	267 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	RHBDL2	Q9NX52	303 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	COQ3	Q9NZJ6	369 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	ORC3	Q9UBD5	711 aa	Predicted RBP	4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	DBF4	Q9UBU7	674 aa	Predicted RBP	4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	GGA2	Q9UJY4	613 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	AURKC	Q9UQB9	309 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	DLGAP4	Q9Y2H0	992 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	USP16	Q9Y5T5	823 aa		4.56	□□□□□ -1.68
CCDC66-222	ENST00000494672	KIF15	Q9NS87	1388 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672		A0A1B0GVG6	124 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672		B9A039	149 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672		K7ERQ8	282 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	IRAK2	O43187	625 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	SLC25A17	O43808	307 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	SSX5	O60225	188 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	ATP9A	O75110	1047 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	CDC123	O75794	336 aa	Predicted RBP	4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	RBBP9	O75884	186 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	DDAH2	O95865	285 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	ASS1	P00966	412 aa	Known RBP	4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	IL6	P05231	212 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	GALT	P07902	379 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	GSTA2	P09210	222 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	DHRS4L1	P0CG22	281 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	RALA	P11233	206 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	PRPS2	P11908	318 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	CYP4B1	P13584	511 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	PRG2	P13727	222 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	DAO	P14920	347 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	CPA3	P15088	417 aa		4.55	□□□□□ -1.68
CCDC66-222	ENST00000494672	IL11	P20809	199 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms