RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 C21orf140B9A014 251 aa32.08■■■□□ 2.73
CBX4-203ENST00000494546 NIPSNAP2O75323 286 aa32.08■■■□□ 2.73
CBX4-203ENST00000494546 MSL3P1P0C860 447 aa32.08■■■□□ 2.73
CBX4-203ENST00000494546 CYP2A7P20853 494 aa32.08■■■□□ 2.73
CBX4-203ENST00000494546 PEBP1P30086 187 aaKnown RBP32.08■■■□□ 2.73
CBX4-203ENST00000494546 KIR2DS3Q14952 304 aa32.08■■■□□ 2.73
CBX4-203ENST00000494546 CILP2Q8IUL8 1156 aa32.08■■■□□ 2.73
CBX4-203ENST00000494546 PPIL6Q8IXY8 311 aa32.08■■■□□ 2.73
CBX4-203ENST00000494546 C2orf73Q8N5S3 287 aaPredicted RBP32.08■■■□□ 2.73
CBX4-203ENST00000494546 LMNTD1Q8N9Z9 388 aa32.08■■■□□ 2.73
CBX4-203ENST00000494546 N4BP2L2Q92802 583 aaPredicted RBP32.08■■■□□ 2.73
CBX4-203ENST00000494546 CLIP3Q96DZ5 547 aa32.08■■■□□ 2.73
CBX4-203ENST00000494546 IL17FQ96PD4 163 aa32.08■■■□□ 2.73
CBX4-203ENST00000494546 GEMIN8Q9NWZ8 242 aaKnown RBP32.08■■■□□ 2.73
CBX4-203ENST00000494546 TSR3Q9UJK0 312 aaKnown RBP32.08■■■□□ 2.73
CBX4-203ENST00000494546 PIEZO2Q9H5I5 2752 aa32.08■■■□□ 2.73
CBX4-203ENST00000494546 B8ZZF3 427 aa32.07■■■□□ 2.72
CBX4-203ENST00000494546 H3BMM5 538 aa32.07■■■□□ 2.72
CBX4-203ENST00000494546 ESR1P03372 595 aa32.07■■■□□ 2.72
CBX4-203ENST00000494546 KLK3P07288 261 aaPredicted RBP32.07■■■□□ 2.72
CBX4-203ENST00000494546 GNG11P61952 73 aa32.07■■■□□ 2.72
CBX4-203ENST00000494546 THOC5Q13769 683 aaKnown RBP32.07■■■□□ 2.72
CBX4-203ENST00000494546 ZIC1Q15915 447 aa32.07■■■□□ 2.72
CBX4-203ENST00000494546 ZNF789Q5FWF6 425 aa32.07■■■□□ 2.72
CBX4-203ENST00000494546 PLEKHS1Q5SXH7 462 aa32.07■■■□□ 2.72
CBX4-203ENST00000494546 ZNF470Q6ECI4 717 aa32.07■■■□□ 2.72
CBX4-203ENST00000494546 TTC23LQ6PF05 361 aa32.07■■■□□ 2.72
CBX4-203ENST00000494546 CENPUQ71F23 418 aa32.07■■■□□ 2.72
CBX4-203ENST00000494546 TCTN2Q96GX1 697 aa32.07■■■□□ 2.72
CBX4-203ENST00000494546 CAPZA3Q96KX2 299 aa32.07■■■□□ 2.72
CBX4-203ENST00000494546 SLC7A5P2Q9GIP4 190 aa32.07■■■□□ 2.72
CBX4-203ENST00000494546 FAM60AQ9NP50 221 aa32.07■■■□□ 2.72
CBX4-203ENST00000494546 ASIC3Q9UHC3 531 aa32.07■■■□□ 2.72
CBX4-203ENST00000494546 SLC39A10Q9ULF5 831 aa32.07■■■□□ 2.72
CBX4-203ENST00000494546 RUVBL2Q9Y230 463 aaKnown RBP32.07■■■□□ 2.72
CBX4-203ENST00000494546 FASNP49327 2511 aaKnown RBP32.06■■■□□ 2.72
CBX4-203ENST00000494546 CREG1O75629 220 aa32.06■■■□□ 2.72
CBX4-203ENST00000494546 CHRM3P20309 590 aa32.06■■■□□ 2.72
CBX4-203ENST00000494546 MAGEA3P43357 314 aa32.06■■■□□ 2.72
CBX4-203ENST00000494546 ITGA1P56199 1179 aa32.06■■■□□ 2.72
CBX4-203ENST00000494546 GRB7Q14451 532 aa32.06■■■□□ 2.72
CBX4-203ENST00000494546 DEFB110Q30KQ9 67 aa32.06■■■□□ 2.72
CBX4-203ENST00000494546 TMEM135Q86UB9 458 aa32.06■■■□□ 2.72
CBX4-203ENST00000494546 TAX1BP1Q86VP1 789 aa32.06■■■□□ 2.72
CBX4-203ENST00000494546 AGGF1Q8N302 714 aaeCLIP32.06■■■□□ 2.72
CBX4-203ENST00000494546 LINC01555Q8NAE3 123 aa32.06■■■□□ 2.72
CBX4-203ENST00000494546 MENTQ9BUN1 341 aa32.06■■■□□ 2.72
CBX4-203ENST00000494546 TWSG1Q9GZX9 223 aa32.06■■■□□ 2.72
CBX4-203ENST00000494546 ADNPQ9H2P0 1102 aa32.06■■■□□ 2.72
CBX4-203ENST00000494546 ACTL8Q9H568 366 aa32.06■■■□□ 2.72
CBX4-203ENST00000494546 ACTR5Q9H9F9 607 aaPredicted RBP32.06■■■□□ 2.72
CBX4-203ENST00000494546 VPS9D1Q9Y2B5 631 aa32.06■■■□□ 2.72
CBX4-203ENST00000494546 NFS1Q9Y697 457 aa32.06■■■□□ 2.72
CBX4-203ENST00000494546 CDC14CA4D256 554 aa32.05■■■□□ 2.72
CBX4-203ENST00000494546 CTAGE9A4FU28 777 aa32.05■■■□□ 2.72
CBX4-203ENST00000494546 E7EQ34 232 aa32.05■■■□□ 2.72
CBX4-203ENST00000494546 F7P08709 466 aaPredicted RBP32.05■■■□□ 2.72
CBX4-203ENST00000494546 CD9P21926 228 aa32.05■■■□□ 2.72
CBX4-203ENST00000494546 ADARP55265 1226 aaKnown RBP32.05■■■□□ 2.72
CBX4-203ENST00000494546 RPS15P62841 145 aaKnown RBP32.05■■■□□ 2.72
CBX4-203ENST00000494546 KCNAB2Q13303 367 aa32.05■■■□□ 2.72
CBX4-203ENST00000494546 SLC5A12Q1EHB4 618 aa32.05■■■□□ 2.72
CBX4-203ENST00000494546 RNASEH2BQ5TBB1 312 aaKnown RBP32.05■■■□□ 2.72
CBX4-203ENST00000494546 CNSTQ6PJW8 725 aa32.05■■■□□ 2.72
CBX4-203ENST00000494546 FAM20CQ8IXL6 584 aa32.05■■■□□ 2.72
CBX4-203ENST00000494546 APOBEC4Q8WW27 367 aaKnown RBP32.05■■■□□ 2.72
CBX4-203ENST00000494546 GPR87Q9BY21 358 aa32.05■■■□□ 2.72
CBX4-203ENST00000494546 CHST8Q9H2A9 424 aa32.05■■■□□ 2.72
CBX4-203ENST00000494546 STARD5Q9NSY2 213 aa32.05■■■□□ 2.72
CBX4-203ENST00000494546 ZCWPW2A0A1B0GU75 182 aa32.04■■■□□ 2.72
CBX4-203ENST00000494546 MEN1O00255 615 aa32.04■■■□□ 2.72
CBX4-203ENST00000494546 FURINP09958 794 aa32.04■■■□□ 2.72
CBX4-203ENST00000494546 PLA2G2AP14555 144 aa32.04■■■□□ 2.72
CBX4-203ENST00000494546 PKMP14618 531 aaKnown RBP32.04■■■□□ 2.72
CBX4-203ENST00000494546 BDKRB1P46663 353 aa32.04■■■□□ 2.72
CBX4-203ENST00000494546 RPS18P62269 152 aaKnown RBP32.04■■■□□ 2.72
CBX4-203ENST00000494546 GPR135Q8IZ08 494 aa32.04■■■□□ 2.72
CBX4-203ENST00000494546 DSELQ8IZU8 1212 aa32.04■■■□□ 2.72
CBX4-203ENST00000494546 RAD51AP1Q96B01 352 aa32.04■■■□□ 2.72
CBX4-203ENST00000494546 SIGLEC10Q96LC7 697 aa32.04■■■□□ 2.72
CBX4-203ENST00000494546 FOPNLQ96NB1 174 aa32.04■■■□□ 2.72
CBX4-203ENST00000494546 LRFN5Q96NI6 719 aa32.04■■■□□ 2.72
CBX4-203ENST00000494546 C20orf96Q9NUD7 363 aaPredicted RBP32.04■■■□□ 2.72
CBX4-203ENST00000494546 INTS10Q9NVR2 710 aaKnown RBP32.04■■■□□ 2.72
CBX4-203ENST00000494546 PYCARDQ9ULZ3 195 aa32.04■■■□□ 2.72
CBX4-203ENST00000494546 COL6A6A6NMZ7 2263 aa32.03■■■□□ 2.72
CBX4-203ENST00000494546 E5RI56 91 aa32.03■■■□□ 2.72
CBX4-203ENST00000494546 RASGRF2O14827 1237 aa32.03■■■□□ 2.72
CBX4-203ENST00000494546 C1orf105O95561 183 aa32.03■■■□□ 2.72
CBX4-203ENST00000494546 S1PR4O95977 384 aa32.03■■■□□ 2.72
CBX4-203ENST00000494546 CTBP1Q13363 440 aa32.03■■■□□ 2.72
CBX4-203ENST00000494546 DENND6AQ8IWF6 608 aa32.03■■■□□ 2.72
CBX4-203ENST00000494546 OR2L8Q8NGY9 312 aa32.03■■■□□ 2.72
CBX4-203ENST00000494546 FAM117AQ9C073 453 aa32.03■■■□□ 2.72
CBX4-203ENST00000494546 SLC25A18Q9H1K4 315 aa32.03■■■□□ 2.72
CBX4-203ENST00000494546 GALPQ9UBC7 116 aa32.03■■■□□ 2.72
CBX4-203ENST00000494546 PCYOX1Q9UHG3 505 aa32.03■■■□□ 2.72
CBX4-203ENST00000494546 MRFAP1Q9Y605 127 aa32.03■■■□□ 2.72
CBX4-203ENST00000494546 ZNF749O43361 778 aa32.02■■■□□ 2.72
CBX4-203ENST00000494546 HCRTR1O43613 425 aa32.02■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms