RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7□□□□□ -1.29
RBM39-239ENST00000494274 GALPQ9UBC7 116 aa7□□□□□ -1.29
RBM39-239ENST00000494274 KCND3Q9UK17 655 aa7□□□□□ -1.29
RBM39-239ENST00000494274 RUVBL2Q9Y230 463 aaKnown RBP7□□□□□ -1.29
RBM39-239ENST00000494274 CDYLQ9Y232 598 aa7□□□□□ -1.29
RBM39-239ENST00000494274 FARSAQ9Y285 508 aaKnown RBP7□□□□□ -1.29
RBM39-239ENST00000494274 BTRCQ9Y297 605 aa7□□□□□ -1.29
RBM39-239ENST00000494274 NFS1Q9Y697 457 aa7□□□□□ -1.29
RBM39-239ENST00000494274 SAR1BQ9Y6B6 198 aa7□□□□□ -1.29
RBM39-239ENST00000494274 MYLKQ15746 1914 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 ARHGEF17Q96PE2 2063 aaPredicted RBP6.99□□□□□ -1.29
RBM39-239ENST00000494274 A0A0J9YY10 115 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 ZCWPW2A0A1B0GU75 182 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 CDC14CA4D256 554 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 B8ZZF3 427 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 E7EQ34 232 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 H3BMM5 538 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 MEN1O00255 615 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 DNALI1O14645 258 aaPredicted RBP6.99□□□□□ -1.29
RBM39-239ENST00000494274 ZNF749O43361 778 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 CREG1O75629 220 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 HAUS5O94927 633 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 SLCO2B1O94956 709 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 C1orf105O95561 183 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 S1PR4O95977 384 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 ESR1P03372 595 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 OGNP20774 298 aaKnown RBP6.99□□□□□ -1.29
RBM39-239ENST00000494274 OAS2P29728 719 aaKnown RBP6.99□□□□□ -1.29
RBM39-239ENST00000494274 PKLRP30613 574 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 GRIA3P42263 894 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 PAFAH1B1P43034 410 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 BDKRB1P46663 353 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 RAB28P51157 221 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 RPS18P62269 152 aaKnown RBP6.99□□□□□ -1.29
RBM39-239ENST00000494274 CDC20Q12834 499 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 GPS2Q13227 327 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 TSTA3Q13630 321 aaPredicted RBP6.99□□□□□ -1.29
RBM39-239ENST00000494274 KIR2DS3Q14952 304 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 ZIC1Q15915 447 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 KYNUQ16719 465 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 LONRF1Q17RB8 773 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 BBS9Q3SYG4 887 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 CCSMST1Q4G0I0 132 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 HSP90AA5PQ58FG0 334 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 HP1BP3Q5SSJ5 553 aaPredicted RBP6.99□□□□□ -1.29
RBM39-239ENST00000494274 PLEKHS1Q5SXH7 462 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 RNF187Q5TA31 235 aaPredicted RBP6.99□□□□□ -1.29
RBM39-239ENST00000494274 IZUMO3Q5VZ72 239 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 PAPD7Q5XG87 772 aaKnown RBP6.99□□□□□ -1.29
RBM39-239ENST00000494274 ZNF470Q6ECI4 717 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 UNC5DQ6UXZ4 953 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 CENPUQ71F23 418 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 TMEM135Q86UB9 458 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 CREG2Q8IUH2 290 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 CILP2Q8IUL8 1156 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 SPNS2Q8IVW8 549 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 DCUN1D3Q8IWE4 304 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 HOMEZQ8IX15 550 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 RAB42Q8N4Z0 105 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 C19orf47Q8N9M1 422 aaKnown RBP6.99□□□□□ -1.29
RBM39-239ENST00000494274 APOBEC4Q8WW27 367 aaKnown RBP6.99□□□□□ -1.29
RBM39-239ENST00000494274 RAD51AP1Q96B01 352 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 SLC22A18Q96BI1 424 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 TCTN2Q96GX1 697 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 CATSPER2Q96P56 530 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 NAPGQ99747 312 aaPredicted RBP6.99□□□□□ -1.29
RBM39-239ENST00000494274 TRIM31Q9BZY9 425 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 CHST8Q9H2A9 424 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 CCDC68Q9H2F9 335 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 ACTR5Q9H9F9 607 aaPredicted RBP6.99□□□□□ -1.29
RBM39-239ENST00000494274 SYTL2Q9HCH5 934 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 IARS2Q9NSE4 1012 aaKnown RBP6.99□□□□□ -1.29
RBM39-239ENST00000494274 VPS9D1Q9Y2B5 631 aa6.99□□□□□ -1.29
RBM39-239ENST00000494274 HEMK1Q9Y5R4 338 aaPredicted RBP6.99□□□□□ -1.29
RBM39-239ENST00000494274 COL27A1Q8IZC6 1860 aaPredicted RBP6.98□□□□□ -1.29
RBM39-239ENST00000494274 KRT87PA6NCN2 255 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 RASGRF2O14827 1237 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 HCRTR1O43613 425 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 BANF1O75531 89 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 OR2B3O76000 313 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 USP1O94782 785 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 CTSBP07858 339 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 FURINP09958 794 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 ERVK-10P10266 1014 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 SFTPCP11686 197 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 MAGP20916 626 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 ALAS2P22557 587 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 PTPN4P29074 926 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 PEBP1P30086 187 aaKnown RBP6.98□□□□□ -1.29
RBM39-239ENST00000494274 CCNFP41002 786 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 SLC1A2P43004 574 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 PTGIRP43119 386 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 MAGEA3P43357 314 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 CARSP49589 748 aaKnown RBP6.98□□□□□ -1.29
RBM39-239ENST00000494274 ITGA1P56199 1179 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 POLE2P56282 527 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 MRPS25P82663 173 aaKnown RBP6.98□□□□□ -1.29
RBM39-239ENST00000494274 NFKB2Q00653 900 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 DR1Q01658 176 aa6.98□□□□□ -1.29
RBM39-239ENST00000494274 DHX9Q08211 1270 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms