RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 NANOGP8Q6NSW7 305 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 TMEM154Q6P9G4 183 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 PROSER1Q86XN7 944 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 KIAA2013Q8IYS2 634 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 SLC22A15Q8IZD6 547 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 ZNF366Q8N895 744 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 SELENOMQ8WWX9 145 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 RAB7BQ96AH8 199 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 ARRDC3Q96B67 414 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 SLCO4A1Q96BD0 722 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 NUS1Q96E22 293 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 CMTM7Q96FZ5 175 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 ZNF514Q96K75 400 aaPredicted RBP10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 FOPNLQ96NB1 174 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 HBEGFQ99075 208 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 KCTD14Q9BQ13 255 aaPredicted RBP10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 DPY30Q9C005 99 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 NANOGQ9H9S0 305 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 DYRK4Q9NR20 520 aa10.52□□□□□ -0.72
PHACTR4-204ENST00000493669 C2orf16Q68DN1 1984 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 C1QTNF3-AMACRE9PGA6 284 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 HNRNPRO43390 633 aaKnown RBP10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 SEC22BO75396 215 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 ADRB3P13945 408 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 JUPP14923 745 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 FCARP24071 287 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 EIF2DP41214 584 aaKnown RBP10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 GRIA3P42263 894 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 LIPEQ05469 1076 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 ZNF234Q14588 700 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 ZXDCQ2QGD7 858 aaPredicted RBP10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 FAM109BQ6ICB4 259 aaPredicted RBP10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 NEK5Q6P3R8 708 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 DLEU7Q6UYE1 221 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 CYP2R1Q6VVX0 501 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 GPR149Q86SP6 731 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 AADATQ8N5Z0 425 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 DNAJB14Q8TBM8 379 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 SLC13A3Q8WWT9 602 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 SLC45A3Q96JT2 553 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 ACPTQ9BZG2 426 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 CLMPQ9H6B4 373 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 HPS4Q9NQG7 708 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 FARSBQ9NSD9 589 aaKnown RBP10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 PDP2Q9P2J9 529 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 ATG2AQ2TAZ0 1938 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 PRRC2BQ5JSZ5 2229 aaKnown RBP10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 DHRS12A0PJE2 317 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 ARHGEF33A8MVX0 844 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 ARPC2O15144 300 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 KCNH1O95259 989 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 PDYNP01213 254 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 FCGR1AP12314 374 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 PSMA4P25789 261 aaKnown RBP10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 CTSCP53634 463 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 PFN3P60673 137 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 HMGCS1Q01581 520 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 FCHO2Q0JRZ9 810 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 CPSF6Q16630 551 aaKnown RBP eCLIP10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 ZNF658BQ4V348 819 aaPredicted RBP10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 USP39Q53GS9 565 aaKnown RBP10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 SLC2A7Q6PXP3 512 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 LIX1Q8N485 282 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 METTL2AQ96IZ6 378 aaKnown RBP10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 FAM129BQ96TA1 746 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 CGREF1Q99674 301 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 HDAC8Q9BY41 377 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 CNOT6Q9ULM6 557 aaKnown RBP10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 ITM2BQ9Y287 266 aa10.52□□□□□ -0.73
PHACTR4-204ENST00000493669 DENND4AQ7Z401 1863 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 SOD1P00441 154 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 LYNP07948 512 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 BMP2P12643 396 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 IL10P22301 178 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 HNRNPFP52597 415 aaKnown RBP10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 FOLH1Q04609 750 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 CSTF3Q12996 717 aaKnown RBP10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 POM121L1PQ3SYA9 428 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 C9orf50Q5SZB4 431 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 FRG2Q64ET8 278 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 TMEM220Q6QAJ8 160 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 GET4Q7L5D6 327 aaPredicted RBP10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 ERMP1Q7Z2K6 904 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 MARVELD2Q8N4S9 558 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 BEND7Q8N7W2 519 aaPredicted RBP10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 ANKFN1Q8N957 763 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 SUSD6Q92537 303 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 ZFYVE19Q96K21 471 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 LINC00615Q96LM1 132 aaPredicted RBP10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 FRG2BQ96QU4 278 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 WRAP53Q9BUR4 548 aaKnown RBP10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 MCOLN1Q9GZU1 580 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 ZFP14Q9HCL3 533 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 C8orf4Q9NR00 106 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 MAGEL2Q9UJ55 1249 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 SLC22A14Q9Y267 594 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 PCDHB3Q9Y5E6 796 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 PDE4DIPQ5VU43 2346 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 COL4A3Q01955 1670 aa10.51□□□□□ -0.73
PHACTR4-204ENST00000493669 OTOL1A6NHN0 477 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms