RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	PDE9A	O76083	593 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	CDK14	O94921	469 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	HRG	P04196	525 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	PDHA1	P08559	390 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	MTHFD1	P11586	935 aa	Known RBP	5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	CXCR2	P25025	360 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	ANP32A	P39687	249 aa	Known RBP	5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	SPINT3	P49223	89 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	KLC1	Q07866	573 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	TNK1	Q13470	666 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	TUBA3C	Q13748	450 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	RFTN1	Q14699	578 aa	Predicted RBP	5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	CAMK4	Q16566	473 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	MAPKAPK3	Q16644	382 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	C15orf59	Q2T9L4	293 aa	Predicted RBP	5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	EMC4	Q5J8M3	183 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	ZNF569	Q5MCW4	686 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	GPRC6A	Q5T6X5	926 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	TUBA3E	Q6PEY2	450 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	ARHGAP36	Q6ZRI8	547 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	RIPOR1	Q6ZS17	1223 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	COX15	Q7KZN9	410 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	HOOK3	Q86VS8	718 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	TRAPPC5	Q8IUR0	188 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	TRIM59	Q8IWR1	403 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	BEST3	Q8N1M1	668 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	METTL27	Q8N6F8	245 aa	Predicted RBP	5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	CCDC185	Q8N715	623 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	EMC1	Q8N766	993 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	MDS2	Q8NDY4	140 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	LINC01560	Q8TB33	94 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	PIH1D2	Q8WWB5	315 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	C18orf8	Q96DM3	657 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	LRRC46	Q96FV0	321 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	PSKH2	Q96QS6	385 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	EIF3C	Q99613	913 aa	Known RBP	5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	CCL19	Q99731	98 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	UTP23	Q9BRU9	249 aa	Known RBP	5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	TTYH2	Q9BSA4	534 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	SPATA16	Q9BXB7	569 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	BEX2	Q9BXY8	128 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	KRTAP17-1	Q9BYP8	105 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	PITPNM3	Q9BZ71	974 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	SLC39A8	Q9C0K1	460 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	NAT10	Q9H0A0	1025 aa	Known RBP	5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	SLC26A1	Q9H2B4	701 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	SIX2	Q9NPC8	291 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	CHMP5	Q9NZZ3	219 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	C3orf18	Q9UK00	162 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	PPIL1	Q9Y3C6	166 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	USF3	Q68DE3	2245 aa		5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	PRKDC	P78527	4128 aa	Known RBP	5.12	□□□□□ -1.59
SEC13-219	ENST00000492602	IGHV1-45	A0A0A0MS14	117 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602		A0A0J9YYE9	177 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602		A0A1B0GX78	115 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	VSTM2B	A6NLU5	285 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	DFFA	O00273	331 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	BTN3A3	O00478	584 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	RASGRF2	O14827	1237 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	HS6ST1	O60243	411 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	LSM8	O95777	96 aa	Known RBP	5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	TRBC1	P01850	177 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	CYP1A1	P04798	512 aa	Predicted RBP	5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	SP1	P08047	785 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	GLI4	P10075	376 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	TFEB	P19484	476 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	UGT1A1	P22309	533 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	SOX18	P35713	384 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	CD96	P40200	585 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	OR1D4	P47884	311 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	MAX	P61244	160 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	AP2B1	P63010	937 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	OC90	Q02509	493 aa	Predicted RBP	5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	SLC10A7	Q0GE19	358 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	FASTK	Q14296	549 aa	Known RBP	5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	KRT33B	Q14525	404 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	MESD	Q14696	234 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	GXYLT1	Q4G148	440 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	HSP90AA4P	Q58FG1	418 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	ALS2CL	Q60I27	953 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	FCRLB	Q6BAA4	426 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	SLC25A25	Q6KCM7	469 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	DPY19L2P1	Q6NXN4	242 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	PPP1R2P3	Q6NXS1	205 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	ZNF585A	Q6P3V2	769 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	ARHGAP11A	Q6P4F7	1023 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	TRIM65	Q6PJ69	517 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	SASS6	Q6UVJ0	657 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	UNC5D	Q6UXZ4	953 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	B3GNT6	Q6ZMB0	384 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	NLRP9	Q7RTR0	991 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	AMZ2	Q86W34	360 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	SLC13A5	Q86YT5	568 aa	Predicted RBP	5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	C19orf47	Q8N9M1	422 aa	Known RBP	5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	OR5M9	Q8NGP3	310 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	DLG3	Q92796	817 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	SLCO2A1	Q92959	643 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	RNASE6	Q93091	150 aa	Known RBP	5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	GLYATL1	Q969I3	302 aa		5.11	□□□□□ -1.59
SEC13-219	ENST00000492602	MIEF2	Q96C03	454 aa		5.11	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms