RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 MED25Q71SY5 747 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 VRK3Q8IV63 474 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 MPP5Q8N3R9 675 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 TMEM102Q8N9M5 508 aaPredicted RBP8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 TEX19Q8NA77 164 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 LINC01555Q8NAE3 123 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 HMGCLL1Q8TB92 370 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 PROKR1Q8TCW9 393 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 C1orf54Q8WWF1 131 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 ASZ1Q8WWH4 475 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 ELMO1Q92556 727 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 NACC2Q96BF6 587 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 CLIP3Q96DZ5 547 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 PSMG3-AS1Q96PY0 264 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 ALS2CR12Q96Q35 445 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 SMAD5Q99717 465 aaKnown RBP8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 HGH1Q9BTY7 390 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 PAK5Q9P286 719 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 SNX7Q9UNH6 387 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 PLAAQ9Y263 795 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 TCAF1Q9Y4C2 921 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 MAP4K5Q9Y4K4 846 aa8.08□□□□□ -1.12
SMARCB1-207ENST00000491967 A0A0J9YY10 115 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 F8W8V4 182 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 AP3B1O00203 1094 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 PRMT5O14744 637 aaPredicted RBP8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 MAP3K7O43318 606 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 KRT86O43790 486 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 CNOT3O75175 753 aaKnown RBP8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 OR2B3O76000 313 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 TMEM63AO94886 807 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 FKBP9O95302 570 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 GAS8O95995 478 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 PTMAP06454 111 aaKnown RBP8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 APRTP07741 180 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 CTSBP07858 339 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 CD63P08962 238 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 ITGAXP20702 1163 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 CYP2A7P20853 494 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 RPS3P23396 243 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 PKLRP30613 574 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 PPARGP37231 505 aaPredicted RBP8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 MAGEA6P43360 314 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 NPY2RP49146 381 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 RAB28P51157 221 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 PGDP52209 483 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 ADARP55265 1226 aaKnown RBP8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 GBX1Q14549 363 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 PTCHD3Q3KNS1 767 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 FAM69BQ5VUD6 431 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 IGFL3Q6UXB1 125 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 NAPRTQ6XQN6 538 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 PRUNE1Q86TP1 453 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 TRIM73Q86UV7 250 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 LRRC6Q86X45 466 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 TAB3Q8N5C8 712 aaPredicted RBP8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 DNAAF3Q8N9W5 541 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 GALNT11Q8NCW6 608 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 FDCSPQ8NFU4 85 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 LKAAEAR1Q8TD35 194 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 BIRC8Q96P09 236 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 IP6K3Q96PC2 410 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 TTC1Q99614 292 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 C17orf62Q9BQA9 187 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 SLC25A23Q9BV35 468 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 KIFC1Q9BW19 673 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 SPRTNQ9H040 489 aaPredicted RBP8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 KLHL25Q9H0H3 589 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 MRM3Q9HC36 420 aaKnown RBP8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 CHRAC1Q9NRG0 131 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 RAB6BQ9NRW1 208 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 SLC22A11Q9NSA0 550 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 C5AR2Q9P296 337 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 MARCH4Q9P2E8 410 aaPredicted RBP8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 ANKMY1Q9P2S6 941 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 PLCL2Q9UPR0 1127 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 ZNF148Q9UQR1 794 aa8.07□□□□□ -1.12
SMARCB1-207ENST00000491967 DOPEY1Q5JWR5 2465 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 CCDC78A2IDD5 438 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 FITM1A5D6W6 292 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 ARGFXA6NJG6 315 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 IQCF5A8MTL0 148 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 TARM1B6A8C7 271 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 CD3EAPO15446 510 aaKnown RBP8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 ZSCAN9O15535 394 aaPredicted RBP8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 KDM1AO60341 852 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 MATN4O95460 622 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 IFNB1P01574 187 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 ZSCAN5DPP0CG00 497 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 CBSLP0DN79 551 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 AGXTP21549 392 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 CD9P21926 228 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 CBSP35520 551 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 TTPAP49638 278 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 CCL11P51671 97 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 RRADP55042 308 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 MLLT10P55197 1068 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 CDK16Q00536 496 aa8.06□□□□□ -1.12
SMARCB1-207ENST00000491967 CHAF1BQ13112 559 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms