RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 PRPF19Q9UMS4 504 aaKnown RBP9.21□□□□□ -0.93
BRCA1-219ENST00000491747 PSMD13Q9UNM6 376 aa9.21□□□□□ -0.93
BRCA1-219ENST00000491747 ZNF195O14628 629 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 DENRO43583 198 aaKnown RBP9.21□□□□□ -0.94
BRCA1-219ENST00000491747 LDB2O43679 373 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 MTX2O75431 263 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 PYGLP06737 847 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 ALPPL2P10696 532 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 COX4I1P13073 169 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 CPA3P15088 417 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 CHRNA6Q15825 494 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 PYCR3Q53H96 274 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 SH2D4BQ5SQS7 431 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 ZCCHC8Q6NZY4 707 aaKnown RBP9.21□□□□□ -0.94
BRCA1-219ENST00000491747 LRRC8BQ6P9F7 803 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 FAM151BQ6UXP7 276 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 SATL1Q86VE3 508 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 TMEM126BQ8IUX1 230 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 PQLC1Q8N2U9 271 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 MARVELD2Q8N4S9 558 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 CATSPER1Q8NEC5 780 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 OR4K2Q8NGD2 314 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 OR52K1Q8NGK4 314 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 BRSK1Q8TDC3 778 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 PPP1R2P1Q96PQ5 205 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 ZSCAN5AQ9BUG6 496 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 SCNM1Q9BWG6 230 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 PTTG2Q9NZH5 202 aa9.21□□□□□ -0.94
BRCA1-219ENST00000491747 H3BNX3 289 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 CCL22O00626 93 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 RFPL3O75679 317 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 SORBS2O94875 1100 aaKnown RBP9.2□□□□□ -0.94
BRCA1-219ENST00000491747 SLC25A14O95258 325 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-219ENST00000491747 CLPTM1O96005 669 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 ZNF8P17098 575 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-219ENST00000491747 LPOP22079 712 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-219ENST00000491747 SPAM1P38567 509 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 GP5P40197 560 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 RPL5P46777 297 aaKnown RBP9.2□□□□□ -0.94
BRCA1-219ENST00000491747 DAB2P98082 770 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 CTBSQ01459 385 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.2□□□□□ -0.94
BRCA1-219ENST00000491747 PERM1Q5SV97 790 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 VWA5B1Q5TIE3 1220 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 GUSBP11Q6P575 273 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 TAF8Q7Z7C8 310 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 GKN2Q86XP6 184 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 UNC5BQ8IZJ1 945 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 KYQ8NBH2 561 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 GLYATL1Q969I3 302 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 CDH19Q9H159 772 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 COG4Q9H9E3 785 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 EIF2B3Q9NR50 452 aaKnown RBP9.2□□□□□ -0.94
BRCA1-219ENST00000491747 RAD18Q9NS91 495 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.2□□□□□ -0.94
BRCA1-219ENST00000491747 TMEM216Q9P0N5 145 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 FKBPLQ9UIM3 349 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 GPR34Q9UPC5 381 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 GPSM3Q9Y4H4 160 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 NCOR2Q9Y618 2525 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 ASXL3Q9C0F0 2248 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 STX7O15400 261 aaKnown RBP9.2□□□□□ -0.94
BRCA1-219ENST00000491747 PSMD3O43242 534 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 NOBOXO60393 691 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 HSPA4LO95757 839 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 POLBP06746 335 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 THRAP10827 490 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 ZNF140P52738 457 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-219ENST00000491747 FOXK2Q01167 660 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 KLF10Q13118 480 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 PEX6Q13608 980 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 HSP90AA5PQ58FG0 334 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 CERCAMQ5T4B2 595 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 ZFP1Q6P2D0 407 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 EPGNQ6UW88 154 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 C16orf89Q6UX73 402 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 FAM46DQ8NEK8 389 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 DCUN1D1Q96GG9 259 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 LRGUKQ96M69 825 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 VPS35Q96QK1 796 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 CPNE1Q99829 537 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 OR2AG1Q9H205 316 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 TRIM39Q9HCM9 518 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 TRNAU1APQ9NX07 287 aaKnown RBP9.2□□□□□ -0.94
BRCA1-219ENST00000491747 GULP1Q9UBP9 304 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 ZNHIT2Q9UHR6 403 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 RAB26Q9ULW5 256 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 DOLKQ9UPQ8 538 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 PKP3Q9Y446 797 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 PCDHGA1Q9Y5H4 931 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 RP1P56715 2156 aa9.2□□□□□ -0.94
BRCA1-219ENST00000491747 GLYATL1P3A0A0U1RQE8 302 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 CPED1A4D0V7 1026 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 FAM149AA5PLN7 773 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 C2orf81A6NN90 581 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 TMEM114B3SHH9 223 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 E9PBE3 544 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 NUAK1O60285 661 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 KLHL41O60662 606 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 H2AFYO75367 372 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms