RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 NME5P56597 212 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 SUMO2P61956 95 aaKnown RBP4.7□□□□□ -1.66
RTN4-215ENST00000491592 TIMM10P62072 90 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 ABATP80404 500 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 BASP1P80723 227 aaKnown RBP4.7□□□□□ -1.66
RTN4-215ENST00000491592 COL10A1Q03692 680 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 TSTA3Q13630 321 aaPredicted RBP4.7□□□□□ -1.66
RTN4-215ENST00000491592 KCNC3Q14003 757 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 ITIH4Q14624 930 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 BTBD16Q32M84 506 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 HERC4Q5GLZ8 1057 aaPredicted RBP4.7□□□□□ -1.66
RTN4-215ENST00000491592 DPY19L2P1Q6NXN4 242 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 TTI2Q6NXR4 508 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 ZNF790Q6PG37 636 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 CLEC9AQ6UXN8 241 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 RBPMS2Q6ZRY4 209 aaKnown RBP4.7□□□□□ -1.66
RTN4-215ENST00000491592 CYB5R4Q7L1T6 521 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 WDR53Q7Z5U6 358 aaPredicted RBP4.7□□□□□ -1.66
RTN4-215ENST00000491592 TMCO2Q7Z6W1 182 aaPredicted RBP4.7□□□□□ -1.66
RTN4-215ENST00000491592 CLYBLQ8N0X4 340 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 METTL25Q8N6Q8 603 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 ZNF366Q8N895 744 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 C11orf44Q8N8P7 122 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 HUS1BQ8NHY5 278 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 ERMNQ8TAM6 284 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 SYN2Q92777 582 aaPredicted RBP4.7□□□□□ -1.66
RTN4-215ENST00000491592 SLAMF9Q96A28 289 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 TMEM186Q96B77 213 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 SGK3Q96BR1 496 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 EFHD2Q96C19 240 aaPredicted RBP4.7□□□□□ -1.66
RTN4-215ENST00000491592 HAPLN3Q96S86 360 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 PIP5K1AQ99755 562 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 SEMA3CQ99985 751 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 SYT17Q9BSW7 474 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 FSD1LQ9BXM9 530 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 CACNG6Q9BXT2 260 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 RNF26Q9BY78 433 aaPredicted RBP4.7□□□□□ -1.66
RTN4-215ENST00000491592 IFIH1Q9BYX4 1025 aaKnown RBP4.7□□□□□ -1.66
RTN4-215ENST00000491592 FAM129AQ9BZQ8 928 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 IKZF4Q9H2S9 585 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 CUEDC2Q9H467 287 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 RNF41Q9H4P4 317 aaPredicted RBP4.7□□□□□ -1.66
RTN4-215ENST00000491592 SLC32A1Q9H598 525 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 MAGEF1Q9HAY2 307 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 PRMT8Q9NR22 394 aaPredicted RBP4.7□□□□□ -1.66
RTN4-215ENST00000491592 PCDHB16Q9NRJ7 776 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 DLL3Q9NYJ7 618 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 HCN3Q9P1Z3 774 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 TRIM10Q9UDY6 481 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 CD300AQ9UGN4 299 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 STEAP1Q9UHE8 339 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 FBXW2Q9UKT8 454 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 ANGPTL2Q9UKU9 493 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 STX8Q9UNK0 236 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 ST3GAL5Q9UNP4 418 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 SLC27A6Q9Y2P4 619 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 PTRH2Q9Y3E5 179 aaKnown RBP4.7□□□□□ -1.66
RTN4-215ENST00000491592 STRAPQ9Y3F4 350 aaKnown RBP4.7□□□□□ -1.66
RTN4-215ENST00000491592 ENTPD2Q9Y5L3 495 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 SCN11AQ9UI33 1791 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 ARFGEF2Q9Y6D5 1785 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 ABCB11O95342 1321 aa4.7□□□□□ -1.66
RTN4-215ENST00000491592 LRP6O75581 1613 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 RTL9Q8NET4 1388 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 LAMB4A4D0S4 1761 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 CCDC187A0A096LP49 1063 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.69□□□□□ -1.66
RTN4-215ENST00000491592 OR2W5A6NFC9 320 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 ZSCAN5BA6NJL1 495 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 CCT8L1PA6NM43 557 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 CCDC188H7C350 402 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 K7ERQ8 282 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 QSOX1O00391 747 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 TGFB1I1O43294 461 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 SPRY2O43597 315 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 SSX5O60225 188 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 KCNJ13O60928 360 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 NIPSNAP2O75323 286 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 PMPCBO75439 489 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 OR2C1O95371 312 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 ATP6V1G2O95670 118 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 TGFAP01135 160 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 PENKP01210 267 aaPredicted RBP4.69□□□□□ -1.66
RTN4-215ENST00000491592 LMNAP02545 664 aaKnown RBP4.69□□□□□ -1.66
RTN4-215ENST00000491592 NPSP0C0P6 89 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 WEE2P0C1S8 567 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 UQCRFS1P1P0C7P4 283 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 CALM1P0DP23 149 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 CALM2P0DP24 149 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 CALM3P0DP25 149 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 PRKAR1AP10644 381 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 HNRNPA2B1P22626 353 aaKnown RBP4.69□□□□□ -1.66
RTN4-215ENST00000491592 CALB2P22676 271 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 MYF6P23409 242 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 NR2F2P24468 414 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 CDC25AP30304 524 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 CYP2C18P33260 490 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 GCKP35557 465 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 HNF1BP35680 557 aa4.69□□□□□ -1.66
RTN4-215ENST00000491592 TAGLN2P37802 199 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms