RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 CCT8P50990 548 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 ALDH3A2P51648 485 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 CCL23P55773 120 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 ERVPABLB-1P60509 514 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 ABHD18Q0P651 414 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 GRB7Q14451 532 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 IHHQ14623 411 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 EIF4HQ15056 248 aaKnown RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 TEAD4Q15561 434 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 CDKN3Q16667 212 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 SLC5A9Q2M3M2 681 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 SLC36A3Q495N2 470 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.2□□□□□ -1.42
FN1-223ENST00000490833 SETMARQ53H47 684 aaPredicted RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 SPIN4Q56A73 249 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 RBM48Q5RL73 367 aaKnown RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 C6orf10Q5SRN2 563 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 CWF19L1Q69YN2 538 aaKnown RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 C22orf39Q6P5X5 142 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 FAM151BQ6UXP7 276 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 CYHR1Q6ZMK1 362 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 Q6ZSR9 355 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 UBE2R2Q712K3 238 aaPredicted RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 ZNF765Q7L2R6 523 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 CYP2U1Q7Z449 544 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 R3HCC1LQ7Z5L2 792 aaKnown RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 DEFB128Q7Z7B8 93 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 SERPINA11Q86U17 422 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 GPR180Q86V85 440 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 CARM1Q86X55 608 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 ERI1Q8IV48 349 aaKnown RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 ZC3H7AQ8IWR0 971 aaKnown RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 CMTM8Q8IZV2 173 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 SFRP1Q8N474 314 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 GALNT4Q8N4A0 578 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 RAB42Q8N4Z0 105 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 KREMEN2Q8NCW0 462 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 SETD9Q8NE22 299 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 OR2T12Q8NG77 320 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 SETD7Q8WTS6 366 aaKnown RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 NAT14Q8WUY8 206 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 LRTOMTQ8WZ04 291 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 RAB7BQ96AH8 199 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 TMEM159Q96B96 161 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 FBXL8Q96CD0 374 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 HIC2Q96JB3 615 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 B3GALT6Q96L58 329 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 CNBD2Q96M20 576 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 SAMD11Q96NU1 681 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 THUMPD3Q9BV44 507 aaKnown RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 ZBP1Q9H171 429 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 TUBB1Q9H4B7 451 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 EHD1Q9H4M9 534 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 COQ10BQ9H8M1 238 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 BRD9Q9H8M2 597 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 BPIFA1Q9NP55 256 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 SLC52A3Q9NQ40 469 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 HPS4Q9NQG7 708 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 ITM2CQ9NQX7 267 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 SPHK2Q9NRA0 654 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 TDP1Q9NUW8 608 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 DNAJC11Q9NVH1 559 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 DNAAF2Q9NVR5 837 aaKnown RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 FAM120CQ9NX05 1096 aaKnown RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 AHSPQ9NZD4 102 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 FAM8A1Q9UBU6 413 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 PRKAG2Q9UGJ0 569 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 LIMD1Q9UGP4 676 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 CIDEBQ9UHD4 219 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 EVLQ9UI08 416 aaPredicted RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 ZNF639Q9UID6 485 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 ZNF490Q9ULM2 529 aaPredicted RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 PPT2Q9UMR5 302 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 RUVBL1Q9Y265 456 aaKnown RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 MAN2B2Q9Y2E5 1009 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 TSC22D4Q9Y3Q8 395 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 KCNE2Q9Y6J6 123 aa6.2□□□□□ -1.42
FN1-223ENST00000490833 DNMT3AQ9Y6K1 912 aaPredicted RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 ZNF638Q14966 1978 aaKnown RBP6.2□□□□□ -1.42
FN1-223ENST00000490833 GREB1Q4ZG55 1949 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 NCF1BA6NI72 391 aaPredicted RBP6.19□□□□□ -1.42
FN1-223ENST00000490833 NCF1CA8MVU1 366 aaPredicted RBP6.19□□□□□ -1.42
FN1-223ENST00000490833 FAM220BPB1ANY3 271 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 H0YIV9 168 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 H3BNH8 94 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 PDLIM1O00151 329 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 MANBAO00462 879 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 CCL22O00626 93 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 GNGT2O14610 69 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 WNT9AO14904 365 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 ADAM12O43184 909 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 TGM5O43548 720 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 OR1I1O60431 355 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 KCNJ13O60928 360 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 UGT2B11O75310 529 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 FGF18O76093 207 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 SLCO2B1O94956 709 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 PRSS23O95084 383 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 CLDN7O95471 211 aa6.19□□□□□ -1.42
FN1-223ENST00000490833 C8AP07357 584 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms