RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 WWOXQ9NZC7 414 aa12.88□□□□□ -0.35
SNX12-205ENST00000490561 ZNF624Q9P2J8 865 aaPredicted RBP12.88□□□□□ -0.35
SNX12-205ENST00000490561 CFAP20Q9Y6A4 193 aaKnown RBP12.88□□□□□ -0.35
SNX12-205ENST00000490561 TP53BP1Q12888 1972 aaPredicted RBP12.87□□□□□ -0.35
SNX12-205ENST00000490561 A8MT66 165 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 PROB1E7EW31 1015 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 NOBOXO60393 691 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 DLX3O60479 287 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 TRIM13O60858 407 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 SNUPNO95149 360 aaKnown RBP12.87□□□□□ -0.35
SNX12-205ENST00000490561 EML2O95834 649 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 GUCA1CO95843 209 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 NEFHP12036 1026 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 MTHFD2P13995 350 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 GGT5P36269 586 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 SERPINB5P36952 375 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 KCNC1P48547 511 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 PIK3CGP48736 1102 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 RAB28P51157 221 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 HHEXQ03014 270 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 PCLAFQ15004 111 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 SETDB1Q15047 1291 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 CYP2A13Q16696 494 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 PFKFB4Q16877 469 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 TUBB8Q3ZCM7 444 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 ANKS6Q68DC2 871 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 SPNS2Q8IVW8 549 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 KLHDC8AQ8IYD2 350 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 PTGR2Q8N8N7 351 aaPredicted RBP12.87□□□□□ -0.35
SNX12-205ENST00000490561 FAM181AQ8N9Y4 354 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 GPR156Q8NFN8 814 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 PPP1R14CQ8TAE6 165 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 HMGCLL1Q8TB92 370 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 RHBDF1Q96CC6 855 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 L3HYPDHQ96EM0 354 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 PKP4Q99569 1192 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 C1QTNF3Q9BXJ4 246 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 PCBD2Q9H0N5 130 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 C12orf65Q9H3J6 166 aaKnown RBP12.87□□□□□ -0.35
SNX12-205ENST00000490561 IL21RQ9HBE5 538 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 SLC40A1Q9NP59 571 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 PTBP2Q9UKA9 531 aaKnown RBP12.87□□□□□ -0.35
SNX12-205ENST00000490561 STK38LQ9Y2H1 464 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 TDRKHQ9Y2W6 561 aaKnown RBP12.87□□□□□ -0.35
SNX12-205ENST00000490561 CACNA1EQ15878 2313 aa12.87□□□□□ -0.35
SNX12-205ENST00000490561 LNP1A1A4G5 178 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 NCF1BA6NI72 391 aaPredicted RBP12.86□□□□□ -0.35
SNX12-205ENST00000490561 LILRA5A6NI73 299 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 NCF1CA8MVU1 366 aaPredicted RBP12.86□□□□□ -0.35
SNX12-205ENST00000490561 ERGP11308 486 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 NCF1P14598 390 aaPredicted RBP12.86□□□□□ -0.35
SNX12-205ENST00000490561 IMPDH1P20839 514 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 GRK2P25098 689 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 PKLRP30613 574 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 ALDH3A1P30838 453 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 GRK6P43250 576 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 ATP1A2P50993 1020 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 DUSP3P51452 185 aaPredicted RBP12.86□□□□□ -0.35
SNX12-205ENST00000490561 PNLIPRP1P54315 467 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 WDR4P57081 412 aaKnown RBP12.86□□□□□ -0.35
SNX12-205ENST00000490561 HERVK_113P63132 956 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 PLCL1Q15111 1095 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 PCBP2Q15366 365 aaKnown RBP eCLIP12.86□□□□□ -0.357e-8■□□□□ 9.2
SNX12-205ENST00000490561 NR0B2Q15466 257 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 CCDC6Q16204 474 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.86□□□□□ -0.35
SNX12-205ENST00000490561 ATG16L1Q676U5 607 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 CAPN13Q6MZZ7 669 aaPredicted RBP12.86□□□□□ -0.35
SNX12-205ENST00000490561 DUS1LQ6P1R4 473 aaKnown RBP12.86□□□□□ -0.35
SNX12-205ENST00000490561 KLHL35Q6PF15 583 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 AGTRAPQ6RW13 159 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 TMEM26Q6ZUK4 368 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 LRRC70Q7Z2Q7 622 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 TAX1BP1Q86VP1 789 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 C10orf107Q8IVU9 208 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 HOMEZQ8IX15 550 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 ARL14Q8N4G2 192 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 OR52E1Q8NGJ3 308 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 MDM1Q8TC05 714 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 LCN9Q8WX39 176 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 TRMOQ9BU70 441 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 ERVK-6Q9BXR3 956 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 SMOC1Q9H4F8 434 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 EPB41L1Q9H4G0 881 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 TMEM9BQ9NQ34 198 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 FSCN3Q9NQT6 498 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 SEMA4GQ9NTN9 838 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 OR6C2Q9NZP2 312 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 OGFRQ9NZT2 677 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 SIRPGQ9P1W8 387 aa12.86□□□□□ -0.35
SNX12-205ENST00000490561 STOX2Q9P2F5 926 aaPredicted RBP12.86□□□□□ -0.35
SNX12-205ENST00000490561 ZFC3H1O60293 1989 aaKnown RBP12.85□□□□□ -0.35
SNX12-205ENST00000490561 FLRT2O43155 660 aa12.85□□□□□ -0.35
SNX12-205ENST00000490561 NUDT21O43809 227 aaKnown RBP12.85□□□□□ -0.35
SNX12-205ENST00000490561 STK16O75716 305 aa12.85□□□□□ -0.35
SNX12-205ENST00000490561 SLC16A8O95907 504 aa12.85□□□□□ -0.35
SNX12-205ENST00000490561 SERPINE1P05121 402 aa12.85□□□□□ -0.35
SNX12-205ENST00000490561 GIMD1P0DJR0 217 aa12.85□□□□□ -0.35
SNX12-205ENST00000490561 PNLIPP16233 465 aa12.85□□□□□ -0.35
SNX12-205ENST00000490561 KCNA4P22459 653 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms