RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 LMNTD2Q8IXW0 634 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 TTC39CQ8N584 583 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 OR5M8Q8NGP6 311 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 OR52N5Q8NH56 324 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 HDAC2Q92769 488 aaKnown RBP3.17□□□□□ -1.9
HMGN1-218ENST00000490032 GPATCH1Q9BRR8 931 aaKnown RBP3.17□□□□□ -1.9
HMGN1-218ENST00000490032 UPF3AQ9H1J1 476 aaKnown RBP3.17□□□□□ -1.9
HMGN1-218ENST00000490032 S1PR5Q9H228 398 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 MYH16Q9H6N6 1097 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 EIF2B3Q9NR50 452 aaKnown RBP3.17□□□□□ -1.9
HMGN1-218ENST00000490032 WSB2Q9NYS7 404 aaPredicted RBP3.17□□□□□ -1.9
HMGN1-218ENST00000490032 ZHX1Q9UKY1 873 aaPredicted RBP3.17□□□□□ -1.9
HMGN1-218ENST00000490032 MOB4Q9Y3A3 225 aa3.17□□□□□ -1.9
HMGN1-218ENST00000490032 IGHV3OR16-10A0A075B7F0 116 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 IGKV6D-41A0A0C4DH26 115 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 A0A1W2PPR1 153 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 ANKRD61A6NGH8 418 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 ZNF195O14628 629 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 EPB41L2O43491 1005 aaKnown RBP3.16□□□□□ -1.9
HMGN1-218ENST00000490032 PRAMEF11O60813 436 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 VPREB1P12018 145 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 CYP2A7P20853 494 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 CCR10P46092 362 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 PAX9P55771 341 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 RAPSNQ13702 412 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 RAB41Q5JT25 222 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 FAAH2Q6GMR7 532 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 TMCO3Q6UWJ1 677 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 TMEM139Q8IV31 216 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 ARHGAP24Q8N264 748 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 Q8N377 158 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 NPEPL1Q8NDH3 523 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 NUP85Q9BW27 656 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 SMARCAD1Q9H4L7 1026 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 PRR34Q9NV39 138 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 SPHK1Q9NYA1 384 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 B3GAT1Q9P2W7 334 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 CACNG4Q9UBN1 327 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 PPP1R3CQ9UQK1 317 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 ANGPTL3Q9Y5C1 460 aa3.16□□□□□ -1.9
HMGN1-218ENST00000490032 OR2A25A4D2G3 310 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 PTGES3LE9PB15 166 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 VTNP04004 478 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 MMP12P39900 470 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 PTGER3P43115 390 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 SLC15A1P46059 708 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 TPD52P55327 224 aaPredicted RBP3.15□□□□□ -1.91
HMGN1-218ENST00000490032 PHLDA2Q53GA4 152 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 SPDYCQ5MJ68 293 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 KRT79Q5XKE5 535 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 DHRS7BQ6IAN0 325 aaPredicted RBP3.15□□□□□ -1.91
HMGN1-218ENST00000490032 SLC25A47Q6Q0C1 308 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 GPRIN3Q6ZVF9 776 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 TMPRSS11FQ6ZWK6 438 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 CEP57Q86XR8 500 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 CFAP206Q8IYR0 622 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.15□□□□□ -1.91
HMGN1-218ENST00000490032 C1orf131Q8NDD1 294 aaKnown RBP3.15□□□□□ -1.91
HMGN1-218ENST00000490032 CCDC107Q8WV48 283 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 ARHGAP45Q92619 1136 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 SAT2Q96F10 170 aaPredicted RBP3.15□□□□□ -1.91
HMGN1-218ENST00000490032 C10orf90Q96M02 699 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 FNDC11Q9BVV2 318 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 TRIM6Q9C030 488 aaPredicted RBP3.15□□□□□ -1.91
HMGN1-218ENST00000490032 OR2B2Q9GZK3 357 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 P4HTMQ9NXG6 502 aa3.15□□□□□ -1.91
HMGN1-218ENST00000490032 SUCLA2Q9P2R7 463 aaPredicted RBP3.15□□□□□ -1.91
HMGN1-218ENST00000490032 WBP11Q9Y2W2 641 aaKnown RBP3.15□□□□□ -1.91
HMGN1-218ENST00000490032 MYH14Q7Z406 1995 aaKnown RBP3.14□□□□□ -1.91
HMGN1-218ENST00000490032 ANKUB1A6NFN9 424 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 MPTX1A8MV57 137 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 VILLO15195 856 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 CREB3O43889 395 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 GLRA3O75311 464 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 GABRA5P31644 462 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 PGFP49763 221 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 ARF3P61204 181 aaPredicted RBP3.14□□□□□ -1.91
HMGN1-218ENST00000490032 ARF1P84077 181 aaKnown RBP3.14□□□□□ -1.91
HMGN1-218ENST00000490032 CYCSP99999 105 aaKnown RBP3.14□□□□□ -1.91
HMGN1-218ENST00000490032 CALCOCO2Q13137 446 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 LY6DQ14210 128 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 FASTKD3Q14CZ7 662 aaKnown RBP3.14□□□□□ -1.91
HMGN1-218ENST00000490032 TNIP1Q15025 636 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 E2F5Q15329 346 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 XKR3Q5GH77 459 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 SLC25A53Q5H9E4 307 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 ELFN2Q5R3F8 820 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 BTN2A1Q7KYR7 527 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 ADIPOR2Q86V24 386 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 NUDT13Q86X67 352 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 ZNF519Q8TB69 540 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 SMAP2Q8WU79 429 aaPredicted RBP3.14□□□□□ -1.91
HMGN1-218ENST00000490032 MPP4Q96JB8 637 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 RAD9AQ99638 391 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 DGCR6LQ9BY27 220 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 SHARPINQ9H0F6 387 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 SERINC1Q9NRX5 453 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 MAN2C1Q9NTJ4 1040 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 PANK4Q9NVE7 773 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 FAM120CQ9NX05 1096 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms