RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ZNF490Q9ULM2 529 aaPredicted RBP9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 LZTS1Q9Y250 596 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 COMMD3-BMI1R4GMX3 469 aa9.35□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ENO4A6NNW6 628 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 NEDD8-MDP1E9PL57 170 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 QSOX1O00391 747 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 SOCS2O14508 198 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ANKRD28O15084 1053 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 TPST1O60507 370 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 TULP3O75386 442 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 AP2A2O94973 939 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 RASAL1O95294 804 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 HIST1H2AGP0C0S8 130 aaPredicted RBP9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ACRP10323 421 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 MTHFD1P11586 935 aaKnown RBP9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 NCK1P16333 377 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 HIST1H2ADP20671 130 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 AOAHP28039 575 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 OXTRP30559 389 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 HNMTP50135 292 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 EPHA5P54756 1037 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 DCDC1P59894 354 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ROR2Q01974 943 aaKnown RBP9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 SEMG2Q02383 582 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 PLOD1Q02809 727 aaPredicted RBP9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 GBX1Q14549 363 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 TEAD2Q15562 447 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 LRRC26Q2I0M4 334 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 IYDQ6PHW0 289 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 BRAT1Q6PJG6 821 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 DLEU7Q6UYE1 221 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 DPY19L3Q6ZPD9 716 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 NEK10Q6ZWH5 1172 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 SPRED1Q7Z699 444 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ADGRG2Q8IZP9 1017 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 LIX1Q8N485 282 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 CBR4Q8N4T8 237 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 KLHL23Q8NBE8 558 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 LEMD2Q8NC56 503 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 DNAJB8Q8NHS0 232 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 HM13Q8TCT9 377 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 SLC22A17Q8WUG5 538 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 NCSTNQ92542 709 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 USP7Q93009 1102 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 TIFAQ96CG3 184 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 RMND5BQ96G75 393 aaPredicted RBP9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 HIST1H2AHQ96KK5 128 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 PPM1MQ96MI6 270 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 TMEM74Q96NL1 305 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 CCDC115Q96NT0 180 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 HBEGFQ99075 208 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 PRPF18Q99633 342 aaKnown RBP9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 SLC29A1Q99808 456 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 HIST1H2AJQ99878 128 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 SH3GL1Q99961 368 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 H2AFJQ9BTM1 129 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 BBS2Q9BXC9 721 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ANKRD60Q9BZ19 345 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ACTL8Q9H568 366 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 SLC32A1Q9H598 525 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 BRD9Q9H8M2 597 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 ACTR8Q9H981 624 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 IL23AQ9NPF7 189 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 PAPOLBQ9NRJ5 636 aaKnown RBP9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 C1orf109Q9NX04 203 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 TBC1D14Q9P2M4 693 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 NFKBIL1Q9UBC1 381 aaPredicted RBP9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 SLC8A2Q9UPR5 921 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 MYRFQ9Y2G1 1151 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 RNF11Q9Y3C5 154 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 CCL27Q9Y4X3 112 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 AK5Q9Y6K8 562 aa9.34□□□□□ -0.91
RAB3GAP1-205ENST00000489858 HTTP42858 3142 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 ARHGAP10A1A4S6 786 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 TSPAN11A1L157 253 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 UPK3BL1B0FP48 263 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 LOC730098B7Z3J9 87 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 UPK3BL2E5RIL1 263 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 GSTA4O15217 222 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SEC22BO75396 215 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 RSL1D1O76021 490 aaKnown RBP9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 FTH1P02794 183 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 IL6P05231 212 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PRPS2P11908 318 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CKMT2P17540 419 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 PTPN2P17706 415 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 POLR2EP19388 210 aaKnown RBP9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 HRH2P25021 359 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 GSTT1P30711 240 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 GGT5P36269 586 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 GDF5P43026 501 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 SLC6A12P48065 614 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 CCT8P50990 548 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 DGKQP52824 942 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 NR1H2P55055 460 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 AP1S2P56377 157 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 OR4D2P58180 307 aa9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 HTRA4P83105 476 aaPredicted RBP9.33□□□□□ -0.92
RAB3GAP1-205ENST00000489858 B4GALNT1Q00973 533 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms