RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 FBXO48Q5FWF7 155 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 PMS2CLQ68D20 193 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 AGTRAPQ6RW13 159 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 RPS27LQ71UM5 84 aaKnown RBP13.77□□□□□ -0.21
VPS26A-205ENST00000489656 RD3Q7Z3Z2 195 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 GOLGA7Q7Z5G4 137 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 NRROSQ86YC3 692 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 HOMEZQ8IX15 550 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 TMEFF1Q8IYR6 380 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 AFAP1L2Q8N4X5 818 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 FBXL6Q8N531 539 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 OR56A3Q8NH54 315 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 RFWD2Q8NHY2 731 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 TRPC4APQ8TEL6 797 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 ESAMQ96AP7 390 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 INSM2Q96T92 566 aaPredicted RBP13.77□□□□□ -0.21
VPS26A-205ENST00000489656 TMEM168Q9H0V1 697 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 TRIT1Q9H3H1 467 aaKnown RBP13.77□□□□□ -0.21
VPS26A-205ENST00000489656 MVB12BQ9H7P6 319 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 SPATA7Q9P0W8 599 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 WDR37Q9Y2I8 494 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 HEBP2Q9Y5Z4 205 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 OR7A17O14581 309 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 VILLO15195 856 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 HDAC3O15379 428 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 KATNA1O75449 491 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 ESRRBO95718 433 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 SLC16A8O95907 504 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 KITP10721 976 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 NME1P15531 152 aaKnown RBP13.76□□□□□ -0.21
VPS26A-205ENST00000489656 EPB42P16452 691 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 MAOBP27338 520 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 RPL10P27635 214 aaKnown RBP13.76□□□□□ -0.21
VPS26A-205ENST00000489656 HSD17B2P37059 387 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 HALP42357 657 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 SH3BP2P78314 561 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 PCDH1Q08174 1060 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 ILF3Q12906 894 aaKnown RBP eCLIP13.76□□□□□ -0.21
VPS26A-205ENST00000489656 ARHGAP19Q14CB8 494 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 CLCA4Q14CN2 919 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 PTCHD3Q3KNS1 767 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 ZNF528Q3MIS6 628 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 SH2D4BQ5SQS7 431 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 LRRC56Q8IYG6 542 aaPredicted RBP13.76□□□□□ -0.21
VPS26A-205ENST00000489656 PHACTR4Q8IZ21 702 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 TEX9Q8N6V9 391 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 PHC3Q8NDX5 983 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 OR5AR1Q8NGP9 310 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 C12orf66Q96MD2 445 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 NTMT1Q9BV86 223 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 GSDMCQ9BYG8 508 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 MID1IP1Q9NPA3 183 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 SEMA4BQ9NPR2 832 aaPredicted RBP13.76□□□□□ -0.21
VPS26A-205ENST00000489656 DNAJC28Q9NX36 388 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 MARCOQ9UEW3 520 aaPredicted RBP13.76□□□□□ -0.21
VPS26A-205ENST00000489656 POLG2Q9UHN1 485 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 KLF15Q9UIH9 416 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 TRAF6Q9Y4K3 522 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 ADAMTS9Q9P2N4 1935 aa13.76□□□□□ -0.21
VPS26A-205ENST00000489656 MUC3AQ02505 3323 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 PDZK1P1A8MUH7 402 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 PPP6CO00743 305 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 AZIN1O14977 448 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 BCAT2O15382 392 aaPredicted RBP13.75□□□□□ -0.21
VPS26A-205ENST00000489656 CCNT2O60583 730 aaKnown RBP13.75□□□□□ -0.21
VPS26A-205ENST00000489656 OTCP00480 354 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 CSF2P04141 144 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 MTHFD1P11586 935 aaKnown RBP13.75□□□□□ -0.21
VPS26A-205ENST00000489656 F3P13726 295 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 AK4P27144 223 aaPredicted RBP13.75□□□□□ -0.21
VPS26A-205ENST00000489656 NDUFS1P28331 727 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 CNR2P34972 360 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 ACTR1BP42025 376 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 GDF5P43026 501 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 AFF3P51826 1226 aaKnown RBP13.75□□□□□ -0.21
VPS26A-205ENST00000489656 ARFIP2P53365 341 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 AQP5P55064 265 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 INHBCP55103 352 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 NXPH1P58417 271 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 ACTR1AP61163 376 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 CDC16Q13042 620 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 TRAF3Q13114 568 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 RPE65Q16518 533 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 RBBP7Q16576 425 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 KANK2Q63ZY3 851 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 GPRIN3Q6ZVF9 776 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 MAVSQ7Z434 540 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 SPATS2Q86XZ4 545 aaKnown RBP13.75□□□□□ -0.21
VPS26A-205ENST00000489656 CLYBLQ8N0X4 340 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 ZNF480Q8WV37 535 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 THOC1Q96FV9 657 aaKnown RBP13.75□□□□□ -0.21
VPS26A-205ENST00000489656 MAGEB10Q96LZ2 347 aaPredicted RBP13.75□□□□□ -0.21
VPS26A-205ENST00000489656 MENTQ9BUN1 341 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 SGPP1Q9BX95 441 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 TMEM120AQ9BXJ8 343 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 NUSAP1Q9BXS6 441 aaKnown RBP13.75□□□□□ -0.21
VPS26A-205ENST00000489656 MIR1-1HGQ9H1L0 117 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 NOL11Q9H8H0 719 aaKnown RBP13.75□□□□□ -0.21
VPS26A-205ENST00000489656 IPPKQ9H8X2 491 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 TNFRSF12AQ9NP84 129 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms