RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 METTL6Q8TCB7 284 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 NANOS1Q8WY41 292 aaKnown RBP8.28□□□□□ -1.08
VTI1A-207ENST00000489357 VOPP1Q96AW1 172 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 SPDL1Q96EA4 605 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 METTL2AQ96IZ6 378 aaKnown RBP8.28□□□□□ -1.08
VTI1A-207ENST00000489357 NSUN5Q96P11 429 aaKnown RBP8.28□□□□□ -1.08
VTI1A-207ENST00000489357 VPS35Q96QK1 796 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 SLC30A3Q99726 388 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 HEPHQ9BQS7 1158 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 ZSCAN5AQ9BUG6 496 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 CD244Q9BZW8 370 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 FAM192AQ9GZU8 254 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 CXorf56Q9H5V9 222 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 BRD9Q9H8M2 597 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 NEUROD4Q9HD90 331 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 SLC52A3Q9NQ40 469 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 ACSS2Q9NR19 701 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 ACTR3BQ9P1U1 418 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 OPTCQ9UBM4 332 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 EIF2B4Q9UI10 523 aaKnown RBP8.28□□□□□ -1.08
VTI1A-207ENST00000489357 RIMS3Q9UJD0 308 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 FBXO10Q9UK96 956 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 ADAMTS6Q9UKP5 1117 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 IKZF3Q9UKT9 509 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 G3BP2Q9UN86 482 aaKnown RBP8.28□□□□□ -1.08
VTI1A-207ENST00000489357 CCL26Q9Y258 94 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 SLC27A6Q9Y2P4 619 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 DTNAQ9Y4J8 743 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 AP4S1Q9Y587 144 aa8.28□□□□□ -1.08
VTI1A-207ENST00000489357 PRORSD1PA6NEY8 169 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 CCDC154A6NI56 674 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 H0Y858 1186 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 NR5A2O00482 541 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 HOXC11O43248 304 aaPredicted RBP8.27□□□□□ -1.09
VTI1A-207ENST00000489357 HNRNPRO43390 633 aaKnown RBP8.27□□□□□ -1.09
VTI1A-207ENST00000489357 NARSO43776 548 aaKnown RBP8.27□□□□□ -1.09
VTI1A-207ENST00000489357 OR4F21O95013 312 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 KRT6AP02538 564 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 FTH1P02794 183 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 KRT6BP04259 564 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 LINC00032P0C843 101 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 TYRP14679 529 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 POLR2EP19388 210 aaKnown RBP8.27□□□□□ -1.09
VTI1A-207ENST00000489357 PRPH2P23942 346 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 AOAHP28039 575 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 HMOX2P30519 316 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 VIPR1P32241 457 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 KRT6CP48668 564 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 POLR2JP52435 117 aaKnown RBP8.27□□□□□ -1.09
VTI1A-207ENST00000489357 SH3BGRP55822 239 aaPredicted RBP8.27□□□□□ -1.09
VTI1A-207ENST00000489357 ERVPABLB-1P60509 514 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 MS4A2Q01362 244 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 PCDH1Q08174 1060 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 SIGLEC14Q08ET2 396 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 TRAF3Q13114 568 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 BOP1Q14137 746 aaKnown RBP8.27□□□□□ -1.09
VTI1A-207ENST00000489357 INPP5AQ14642 412 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 EIF4HQ15056 248 aaKnown RBP8.27□□□□□ -1.09
VTI1A-207ENST00000489357 MTX3Q5HYI7 312 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 C6orf136Q5SQH8 315 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 C10orf62Q5T681 223 aaPredicted RBP8.27□□□□□ -1.09
VTI1A-207ENST00000489357 IL23RQ5VWK5 629 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 PAOXQ6QHF9 649 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 RNF111Q6ZNA4 994 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 DPY19L3Q6ZPD9 716 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 RPS27LQ71UM5 84 aaKnown RBP8.27□□□□□ -1.09
VTI1A-207ENST00000489357 MILR1Q7Z6M3 343 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 ADIPOR2Q86V24 386 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 NLRP8Q86W28 1048 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 SPATA24Q86W54 205 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 ZFAND4Q86XD8 727 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 KBTBD2Q8IY47 623 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 NRSN1Q8IZ57 195 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 MARVELD2Q8N4S9 558 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 TRAM1L1Q8N609 369 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 GPR26Q8NDV2 337 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 DDHD1Q8NEL9 900 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 ST13P5Q8NFI4 369 aaPredicted RBP8.27□□□□□ -1.09
VTI1A-207ENST00000489357 TNIP2Q8NFZ5 429 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 OR2A12Q8NGT7 310 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 OR2T34Q8NGX1 318 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 OR2T3Q8NH03 318 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 BPIFB1Q8TDL5 484 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 RHBDF1Q96CC6 855 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 LRRC58Q96CX6 371 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 ZNF837Q96EG3 531 aaPredicted RBP8.27□□□□□ -1.09
VTI1A-207ENST00000489357 SLC45A3Q96JT2 553 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 MARK4Q96L34 752 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 SH3GL1Q99961 368 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 KXD1Q9BQD3 176 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 SLC12A9Q9BXP2 914 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 TNKS2Q9H2K2 1166 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 SLC32A1Q9H598 525 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 NOL11Q9H8H0 719 aaKnown RBP8.27□□□□□ -1.09
VTI1A-207ENST00000489357 IPPKQ9H8X2 491 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 PARVBQ9HBI1 364 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 FBRSL1Q9HCM7 1045 aaKnown RBP8.27□□□□□ -1.09
VTI1A-207ENST00000489357 SARS2Q9NP81 518 aaKnown RBP8.27□□□□□ -1.09
VTI1A-207ENST00000489357 WWOXQ9NZC7 414 aa8.27□□□□□ -1.09
VTI1A-207ENST00000489357 GALPQ9UBC7 116 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms