RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 DLGAP3O95886 979 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 ERVK-10P10266 1014 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 UGT2B7P16662 529 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 CD9P21926 228 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 PKLRP30613 574 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 ELK3P41970 407 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 GPR19Q15760 415 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 MSS51Q4VC12 460 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 TAF1BQ53T94 588 aaPredicted RBP13.82□□□□□ -0.2
BRCA1-218ENST00000489037 ZNF789Q5FWF6 425 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 CNSTQ6PJW8 725 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 TMEM126BQ8IUX1 230 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 SNRNP27Q8WVK2 155 aaKnown RBP13.82□□□□□ -0.2
BRCA1-218ENST00000489037 CFAP36Q96G28 342 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 PPM1MQ96MI6 270 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 TRAPPC9Q96Q05 1148 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 PITPNM3Q9BZ71 974 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 SPRY4Q9C004 299 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 SLC7A5P2Q9GIP4 190 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 FAM114A2Q9NRY5 505 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.82□□□□□ -0.2
BRCA1-218ENST00000489037 KLHL42Q9P2K6 505 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 SERTAD3Q9UJW9 196 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 RALYQ9UKM9 306 aaKnown RBP13.82□□□□□ -0.2
BRCA1-218ENST00000489037 CHMP2BQ9UQN3 213 aa13.82□□□□□ -0.2
BRCA1-218ENST00000489037 UTP11Q9Y3A2 253 aaKnown RBP13.82□□□□□ -0.2
BRCA1-218ENST00000489037 A0A0J9YY10 115 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 RASGRF2O14827 1237 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 HAUS5O94927 633 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 C1orf105O95561 183 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 CATP04040 527 aaKnown RBP13.81□□□□□ -0.2
BRCA1-218ENST00000489037 LIFP15018 202 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 ST6GAL1P15907 406 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 RPL21P46778 160 aaKnown RBP13.81□□□□□ -0.2
BRCA1-218ENST00000489037 CARSP49589 748 aaKnown RBP13.81□□□□□ -0.2
BRCA1-218ENST00000489037 MPP1Q00013 466 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 C2orf54Q08AI8 447 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 PDIA2Q13087 525 aaKnown RBP13.81□□□□□ -0.2
BRCA1-218ENST00000489037 SLC5A12Q1EHB4 618 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 KLHL38Q2WGJ6 581 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 HP1BP3Q5SSJ5 553 aaPredicted RBP13.81□□□□□ -0.2
BRCA1-218ENST00000489037 KIAA0408Q6ZU52 694 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 NEK10Q6ZWH5 1172 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 TIPARPQ7Z3E1 657 aaKnown RBP13.81□□□□□ -0.2
BRCA1-218ENST00000489037 GALNT6Q8NCL4 622 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 OR2L8Q8NGY9 312 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 KCNJ9Q92806 393 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 INPP5DQ92835 1189 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 CERS2Q96G23 380 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 TCTN2Q96GX1 697 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 C16orf45Q96MC5 204 aaPredicted RBP13.81□□□□□ -0.2
BRCA1-218ENST00000489037 OR2A14Q96R47 310 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 ERP44Q9BS26 406 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 RAB17Q9H0T7 212 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 INTS7Q9NVH2 962 aaKnown RBP13.81□□□□□ -0.2
BRCA1-218ENST00000489037 TSR3Q9UJK0 312 aaKnown RBP13.81□□□□□ -0.2
BRCA1-218ENST00000489037 PADI1Q9ULC6 663 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 PCDHGA4Q9Y5G9 962 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 NFS1Q9Y697 457 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 CACNA1GO43497 2377 aa13.81□□□□□ -0.2
BRCA1-218ENST00000489037 ZNF891A8MT65 544 aaPredicted RBP13.8□□□□□ -0.2
BRCA1-218ENST00000489037 TMEM150CB9EJG8 249 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 ERVH48-1M5A8F1 160 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 CPNE3O75131 537 aaKnown RBP13.8□□□□□ -0.2
BRCA1-218ENST00000489037 SCRG1O75711 98 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 URI1O94763 535 aaPredicted RBP13.8□□□□□ -0.2
BRCA1-218ENST00000489037 ENO3P13929 434 aaPredicted RBP13.8□□□□□ -0.2
BRCA1-218ENST00000489037 PVRP15151 417 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 ZNF28P17035 718 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 CYP2A7P20853 494 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 SKIV2L2P42285 1042 aaKnown RBP13.8□□□□□ -0.2
BRCA1-218ENST00000489037 BDKRB1P46663 353 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 CLCN7P51798 805 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 MC1RQ01726 317 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 SRSF6Q13247 344 aaKnown RBP13.8□□□□□ -0.2
BRCA1-218ENST00000489037 ACSBG2Q5FVE4 666 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 PWWP2BQ6NUJ5 590 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 ANKMY2Q8IV38 441 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 GPR135Q8IZ08 494 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 UNC5BQ8IZJ1 945 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 C19orf47Q8N9M1 422 aaKnown RBP13.8□□□□□ -0.2
BRCA1-218ENST00000489037 C2CD4AQ8NCU7 369 aaPredicted RBP13.8□□□□□ -0.2
BRCA1-218ENST00000489037 LSM14AQ8ND56 463 aaKnown RBP13.8□□□□□ -0.2
BRCA1-218ENST00000489037 ZNF501Q96CX3 271 aaPredicted RBP13.8□□□□□ -0.2
BRCA1-218ENST00000489037 TRIM44Q96DX7 344 aaPredicted RBP13.8□□□□□ -0.2
BRCA1-218ENST00000489037 NRTNQ99748 197 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 AARSD1Q9BTE6 412 aaKnown RBP13.8□□□□□ -0.2
BRCA1-218ENST00000489037 KLHL25Q9H0H3 589 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 DPH5Q9H2P9 285 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 SPHK1Q9NYA1 384 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 TAS2R13Q9NYV9 303 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 SPATA7Q9P0W8 599 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 WHRNQ9P202 907 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 TRMT6Q9UJA5 497 aaKnown RBP13.8□□□□□ -0.2
BRCA1-218ENST00000489037 DHRS7Q9Y394 339 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 TEX264Q9Y6I9 313 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 ZFHX4Q86UP3 3567 aa13.8□□□□□ -0.2
BRCA1-218ENST00000489037 CFAP47Q6ZTR5 3102 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 LOC101059948A0A1B0GTJ6 334 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 ZNF839A8K0R7 811 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms