RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 SH3BP5O60239 455 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 KDM1AO60341 852 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 GFRA3O60609 400 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 SMIM24O75264 130 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 LDOC1O95751 146 aaPredicted RBP11.97□□□□□ -0.49
TRAIP-209ENST00000488860 CD59P13987 128 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 GFAPP14136 432 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 RPA3P35244 121 aaPredicted RBP11.97□□□□□ -0.49
TRAIP-209ENST00000488860 FASLGP48023 281 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 SLC14A1Q13336 389 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 TSTA3Q13630 321 aaPredicted RBP11.97□□□□□ -0.49
TRAIP-209ENST00000488860 TGFBIQ15582 683 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 CCDC153Q494R4 210 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.97□□□□□ -0.49
TRAIP-209ENST00000488860 STPG1Q5TH74 334 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 GUSBP11Q6P575 273 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 KIAA2013Q8IYS2 634 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 C2orf73Q8N5S3 287 aaPredicted RBP11.97□□□□□ -0.49
TRAIP-209ENST00000488860 ARMC2Q8NEN0 867 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 OR9A1PQ8NGU1 263 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 RHEBL1Q8TAI7 183 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 MGARPQ8TDB4 240 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 LCN9Q8WX39 176 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 CCDC74AQ96AQ1 378 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 RAD51AP1Q96B01 352 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 ATOH8Q96SQ7 321 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 SLC38A3Q99624 504 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 NRTNQ99748 197 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 MRPL57Q9BQC6 102 aaKnown RBP11.97□□□□□ -0.49
TRAIP-209ENST00000488860 TBC1D10AQ9BXI6 508 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 SYNDIG1Q9H7V2 258 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 SLC40A1Q9NP59 571 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 EVA1BQ9NVM1 165 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 WWOXQ9NZC7 414 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 LRIT1Q9P2V4 623 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 EMCNQ9ULC0 261 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 PADI4Q9UM07 663 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 ICKQ9UPZ9 632 aa11.97□□□□□ -0.49
TRAIP-209ENST00000488860 WDR87Q6ZQQ6 2873 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 TMEM120BA0PK00 339 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 MYO1CO00159 1063 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 PPM1DO15297 605 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 PRPF4O43172 522 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRAIP-209ENST00000488860 TYROBPO43914 113 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 PLIN3O60664 434 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 PROCP04070 461 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 ANXA5P08758 320 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 TAC1P20366 129 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 PKLRP30613 574 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 AP1S2P56377 157 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 PROX2Q3B8N5 592 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 FBXO48Q5FWF7 155 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 TMEM26Q6ZUK4 368 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 EFL1Q7Z2Z2 1120 aaKnown RBP11.96□□□□□ -0.49
TRAIP-209ENST00000488860 C17orf82Q86X59 251 aaPredicted RBP11.96□□□□□ -0.49
TRAIP-209ENST00000488860 RASGRP3Q8IV61 690 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 RBM12BQ8IXT5 1001 aaKnown RBP11.96□□□□□ -0.49
TRAIP-209ENST00000488860 SYTL1Q8IYJ3 562 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 FBXO39Q8N4B4 442 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 Q8N9G6 341 aaPredicted RBP11.96□□□□□ -0.49
TRAIP-209ENST00000488860 FAM181AQ8N9Y4 354 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 LMNTD1Q8N9Z9 388 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 FBXO15Q8NCQ5 510 aaPredicted RBP11.96□□□□□ -0.49
TRAIP-209ENST00000488860 PPFIBP2Q8ND30 876 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 OR4E2Q8NGC2 313 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 OR10G6Q8NH81 332 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 SH3KBP1Q96B97 665 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 MED8Q96G25 268 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 PKNOX2Q96KN3 472 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 CCDC138Q96M89 665 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 RAB11FIP5Q9BXF6 653 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.96□□□□□ -0.49
TRAIP-209ENST00000488860 RDH14Q9HBH5 336 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 MLXIPLQ9NP71 852 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 SSU72Q9NP77 194 aaKnown RBP11.96□□□□□ -0.49
TRAIP-209ENST00000488860 MED4Q9NPJ6 270 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 NCKIPSDQ9NZQ3 722 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 SPATA7Q9P0W8 599 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 STOX2Q9P2F5 926 aaPredicted RBP11.96□□□□□ -0.49
TRAIP-209ENST00000488860 MID2Q9UJV3 735 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 PLLPQ9Y342 182 aa11.96□□□□□ -0.49
TRAIP-209ENST00000488860 LY6G6EA0A0G2JKS1 128 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 LILRA5A6NI73 299 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 H3BQF6 201 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 NUDT21O43809 227 aaKnown RBP11.95□□□□□ -0.5
TRAIP-209ENST00000488860 ZWINTO95229 277 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 SLC16A8O95907 504 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 TPBGLP0DKB5 382 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 MYL2P10916 166 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 GLB1P16278 677 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 TYRP1P17643 537 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 IMPA1P29218 277 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 ALDH4A1P30038 563 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 SHMT2P34897 504 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 KCNC1P48547 511 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 RAB28P51157 221 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 DUSP3P51452 185 aaPredicted RBP11.95□□□□□ -0.5
TRAIP-209ENST00000488860 GRB7Q14451 532 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 PFKFB4Q16877 469 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 C18orf21Q32NC0 220 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms