RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 FCAMRQ8WWV6 532 aa3□□□□□ -1.93
CD46-215ENST00000488596 SIPA1Q96FS4 1042 aa3□□□□□ -1.93
CD46-215ENST00000488596 SCRN2Q96FV2 425 aa3□□□□□ -1.93
CD46-215ENST00000488596 SGK494Q96LW2 274 aa3□□□□□ -1.93
CD46-215ENST00000488596 CFAP57Q96MR6 1250 aa3□□□□□ -1.93
CD46-215ENST00000488596 FEVQ99581 238 aa3□□□□□ -1.93
CD46-215ENST00000488596 ARRDC1-AS1Q9H2J1 176 aa3□□□□□ -1.93
CD46-215ENST00000488596 BICC1Q9H694 974 aaKnown RBP3□□□□□ -1.93
CD46-215ENST00000488596 ERVMER34-1Q9H9K5 563 aa3□□□□□ -1.93
CD46-215ENST00000488596 ZBTB20Q9HC78 741 aaPredicted RBP3□□□□□ -1.93
CD46-215ENST00000488596 ZKSCAN7Q9P0L1 754 aaPredicted RBP3□□□□□ -1.93
CD46-215ENST00000488596 DAPK2Q9UIK4 370 aa3□□□□□ -1.93
CD46-215ENST00000488596 ABT1Q9ULW3 272 aaKnown RBP3□□□□□ -1.93
CD46-215ENST00000488596 SLC7A7Q9UM01 511 aa3□□□□□ -1.93
CD46-215ENST00000488596 RIPK3Q9Y572 518 aa3□□□□□ -1.93
CD46-215ENST00000488596 NEMP2A6NFY4 417 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 PTGESO14684 152 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 CIDEAO60543 219 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 PAK4O96013 591 aaPredicted RBP2.99□□□□□ -1.93
CD46-215ENST00000488596 IGHV2-70P01814 119 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 ATP5BP06576 529 aaKnown RBP2.99□□□□□ -1.93
CD46-215ENST00000488596 RAB40ALP0C0E4 278 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 B3GALT5-AS1P59052 145 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 LGALS3BPQ08380 585 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 ZNF415Q09FC8 603 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 PPIGQ13427 754 aaKnown RBP eCLIP2.99□□□□□ -1.933e-9■■□□□ 12.6
CD46-215ENST00000488596 SYT14P1Q58G82 188 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 TECRLQ5HYJ1 363 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 PLA2G4FQ68DD2 849 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 SLC27A1Q6PCB7 646 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 SHQ1Q6PI26 577 aaKnown RBP2.99□□□□□ -1.93
CD46-215ENST00000488596 C19orf48Q6RUI8 117 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 IL27RAQ6UWB1 636 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 SUSD1Q6UWL2 747 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 LINGO4Q6UY18 593 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 DET1Q7L5Y6 550 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 CCDC186Q7Z3E2 898 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 SLFN11Q7Z7L1 901 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 ZNF554Q86TJ5 538 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 VSIG1Q86XK7 387 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 MFN1Q8IWA4 741 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 NPEPL1Q8NDH3 523 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 KLHDC9Q8NEP7 349 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 OR11H4Q8NGC9 324 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 OR1J1Q8NGS3 322 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 KIF18AQ8NI77 898 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 GRHL3Q8TE85 626 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 HSD17B8Q92506 261 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 TAF15Q92804 592 aaKnown RBP eCLIP2.99□□□□□ -1.93
CD46-215ENST00000488596 WBP2Q969T9 261 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 ARSGQ96EG1 525 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 THOC1Q96FV9 657 aaKnown RBP2.99□□□□□ -1.93
CD46-215ENST00000488596 OTUB1Q96FW1 271 aaPredicted RBP2.99□□□□□ -1.93
CD46-215ENST00000488596 CPNE1Q99829 537 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 RHNO1Q9BSD3 238 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 MMP28Q9H239 520 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 FAM118AQ9NWS6 357 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 TBC1D7Q9P0N9 293 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 STK26Q9P289 416 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 CPSF3Q9UKF6 684 aaKnown RBP2.99□□□□□ -1.93
CD46-215ENST00000488596 WDR81Q562E7 1941 aa2.99□□□□□ -1.93
CD46-215ENST00000488596 DNM1LO00429 736 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 EIF5BO60841 1220 aaKnown RBP2.98□□□□□ -1.93
CD46-215ENST00000488596 SLC22A3O75751 556 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 CAVIN2O95810 425 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 TSHBP01222 138 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 HSPA8P11142 646 aaKnown RBP2.98□□□□□ -1.93
CD46-215ENST00000488596 FGF5P12034 268 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 FDPSP14324 419 aaKnown RBP2.98□□□□□ -1.93
CD46-215ENST00000488596 CD22P20273 847 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 PTAFRP25105 342 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 HSPA4P34932 840 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 MAT1AQ00266 395 aaKnown RBP2.98□□□□□ -1.93
CD46-215ENST00000488596 PPARDQ03181 441 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 VEZF1Q14119 521 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 PSMD6Q15008 389 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 HYAL4Q2M3T9 481 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 ITPRIPL2Q3MIP1 535 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 SPDYCQ5MJ68 293 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 PPP1R21Q6ZMI0 780 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 MARK2Q7KZI7 788 aaKnown RBP2.98□□□□□ -1.93
CD46-215ENST00000488596 TRMT1LQ7Z2T5 733 aaKnown RBP2.98□□□□□ -1.93
CD46-215ENST00000488596 EID3Q8N140 333 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 STPG4Q8N801 248 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 MAPKAPK5-AS1Q8N8E1 139 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 LMNTD1Q8N9Z9 388 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 THAP8Q8NA92 274 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 PPFIBP2Q8ND30 876 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 KBTBD8Q8NFY9 601 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 ATL1Q8WXF7 558 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 TMEM143Q96AN5 459 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 SPSB1Q96BD6 273 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 DHX58Q96C10 678 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 SLC47A1Q96FL8 570 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 KATNB1Q9BVA0 655 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 ZNF334Q9HCZ1 680 aaPredicted RBP2.98□□□□□ -1.93
CD46-215ENST00000488596 ECHDC1Q9NTX5 307 aa2.98□□□□□ -1.93
CD46-215ENST00000488596 ZNF701Q9NV72 531 aaPredicted RBP2.98□□□□□ -1.93
CD46-215ENST00000488596 CHCHD3Q9NX63 227 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms