RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 CCDC88CQ9P219 2028 aa11.86□□□□□ -0.51
TTC3-221ENST00000488522 TRBV5-4A0A0C4DH59 114 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 GOLGA6L10A0A0M3HER8 536 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 GSAPA4D1B5 854 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 ANKUB1A6NFN9 424 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 MAP3K7O43318 606 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 ZNF189O75820 626 aaPredicted RBP11.85□□□□□ -0.51
TTC3-221ENST00000488522 ANXA9O76027 345 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 RBP3P10745 1247 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 RALBP11234 206 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 GCGRP47871 477 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 ZNF140P52738 457 aaPredicted RBP11.85□□□□□ -0.51
TTC3-221ENST00000488522 GEMP55040 296 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 SIX1Q15475 284 aaPredicted RBP11.85□□□□□ -0.51
TTC3-221ENST00000488522 LYPLAL1Q5VWZ2 237 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 MRPL14Q6P1L8 145 aaKnown RBP11.85□□□□□ -0.51
TTC3-221ENST00000488522 DARS2Q6PI48 645 aaKnown RBP11.85□□□□□ -0.51
TTC3-221ENST00000488522 SPESP1Q6UW49 350 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 IGFL2Q6UWQ7 119 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 SNX20Q7Z614 316 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 AMIGO1Q86WK6 493 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 CFAP206Q8IYR0 622 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 C19orf47Q8N9M1 422 aaKnown RBP11.85□□□□□ -0.51
TTC3-221ENST00000488522 CLEC1AQ8NC01 280 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 ST6GALNAC3Q8NDV1 305 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 NAT14Q8WUY8 206 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 C1orf54Q8WWF1 131 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 ATG4AQ8WYN0 398 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 TM9SF4Q92544 642 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.85□□□□□ -0.51
TTC3-221ENST00000488522 COPS8Q99627 209 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 ACTR10Q9NZ32 417 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 NTNG1Q9Y2I2 539 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 DOCK10Q96BY6 2186 aa11.85□□□□□ -0.51
TTC3-221ENST00000488522 SNRNP200O75643 2136 aaKnown RBP11.84□□□□□ -0.51
TTC3-221ENST00000488522 CFAP99D6REC4 459 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 H7C0S8 307 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 LIASO43766 372 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 CNOT3O75175 753 aaKnown RBP11.84□□□□□ -0.51
TTC3-221ENST00000488522 STK10O94804 968 aaKnown RBP11.84□□□□□ -0.51
TTC3-221ENST00000488522 ONECUT2O95948 504 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 AGTP01019 485 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 POLBP06746 335 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 CBSLP0DN79 551 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 ATP1B2P14415 290 aaPredicted RBP11.84□□□□□ -0.51
TTC3-221ENST00000488522 PVRP15151 417 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 RBL1P28749 1068 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 OTX2P32243 289 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 CBSP35520 551 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 FOLR3P41439 243 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 PAFAH1B1P43034 410 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 KRT33BQ14525 404 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 CCNG2Q16589 344 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 GPR33Q49SQ1 333 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 C1QL3Q5VWW1 255 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 PPP1R32Q7Z5V6 425 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 CREG2Q8IUH2 290 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 GPR135Q8IZ08 494 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 CISD2Q8N5K1 135 aaKnown RBP11.84□□□□□ -0.51
TTC3-221ENST00000488522 FLVCR1-AS1Q8TAF5 88 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 SLC35B2Q8TB61 432 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 PPP4R1Q8TF05 950 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 DCUN1D1Q96GG9 259 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 FERD3LQ96RJ6 166 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 FICDQ9BVA6 458 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 AP1M1Q9BXS5 423 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 ARNT2Q9HBZ2 717 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 FAM60AQ9NP50 221 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 ENAMQ9NRM1 1142 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 HOMER3Q9NSC5 361 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 P4HTMQ9NXG6 502 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 ZDHHC3Q9NYG2 299 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 SMARCAL1Q9NZC9 954 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 RNF14Q9UBS8 474 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 RSPH14Q9UHP6 348 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 CRLS1Q9UJA2 301 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 SRPK3Q9UPE1 567 aa11.84□□□□□ -0.51
TTC3-221ENST00000488522 CROCCQ5TZA2 2017 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 FBN2P35556 2912 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 IFRD1O00458 451 aaPredicted RBP11.83□□□□□ -0.52
TTC3-221ENST00000488522 PEX12O00623 359 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 E2F3O00716 465 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 KCNN4O15554 427 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 OR2B3O76000 313 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 CRTAMO95727 393 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 UMODP07911 640 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 ITGALP20701 1170 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 TNFRSF8P28908 595 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 PDHA2P29803 388 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 DCDP81605 110 aaKnown RBP11.83□□□□□ -0.52
TTC3-221ENST00000488522 SNX1Q13596 522 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 RAPSNQ13702 412 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 ZIC1Q15915 447 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 ITPRIPL1Q6GPH6 555 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 DENND5AQ6IQ26 1287 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 CUZD1Q86UP6 607 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 ZADH2Q8N4Q0 377 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 PRELID2Q8N945 189 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 OR13C4Q8NGS5 318 aa11.83□□□□□ -0.52
TTC3-221ENST00000488522 KIF18AQ8NI77 898 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms