RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 DERL2Q9GZP9 239 aa10.02□□□□□ -0.81
SKA1-204ENST00000488454 ZMYND15Q9H091 742 aa10.02□□□□□ -0.81
SKA1-204ENST00000488454 KIR3DX1Q9H7L2 352 aa10.02□□□□□ -0.81
SKA1-204ENST00000488454 UCK1Q9HA47 277 aa10.02□□□□□ -0.81
SKA1-204ENST00000488454 NMRAL1Q9HBL8 299 aa10.02□□□□□ -0.81
SKA1-204ENST00000488454 KCNK4Q9NYG8 393 aa10.02□□□□□ -0.81
SKA1-204ENST00000488454 CTNNAL1Q9UBT7 734 aa10.02□□□□□ -0.81
SKA1-204ENST00000488454 LNPEPQ9UIQ6 1025 aa10.02□□□□□ -0.81
SKA1-204ENST00000488454 NFS1Q9Y697 457 aa10.02□□□□□ -0.81
SKA1-204ENST00000488454 PTPRZ1P23471 2315 aaPredicted RBP10.02□□□□□ -0.81
SKA1-204ENST00000488454 CABIN1Q9Y6J0 2220 aa10.02□□□□□ -0.81
SKA1-204ENST00000488454 FRYLO94915 3013 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 RIF1Q5UIP0 2472 aaKnown RBP10.01□□□□□ -0.81
SKA1-204ENST00000488454 GOLGA6L10A6NI86 522 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 BTN3A1O00481 513 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 TM4SF5O14894 197 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 PSIP1O75475 530 aaKnown RBP10.01□□□□□ -0.81
SKA1-204ENST00000488454 ALDOAP04075 364 aaKnown RBP10.01□□□□□ -0.81
SKA1-204ENST00000488454 GP1BAP07359 652 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 LTA4HP09960 611 aaKnown RBP10.01□□□□□ -0.81
SKA1-204ENST00000488454 CDK4P11802 303 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 COL6A2P12110 1019 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 H2AFXP16104 143 aaPredicted RBP10.01□□□□□ -0.81
SKA1-204ENST00000488454 OR1D5P58170 312 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 E2F1Q01094 437 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 GPR18Q14330 331 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 CSHL1Q14406 222 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 CASP8Q14790 479 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 KRT71Q3SY84 523 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 CEP85LQ5SZL2 805 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 ARMC6Q6NXE6 501 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 FRA10AC1Q70Z53 315 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 GLRX5Q86SX6 157 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 BAHD1Q8TBE0 780 aaPredicted RBP10.01□□□□□ -0.81
SKA1-204ENST00000488454 ACMSDQ8TDX5 336 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 ANKRD49Q8WVL7 239 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 LCN9Q8WX39 176 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 POM121Q96HA1 1249 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 ZIM3Q96PE6 472 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 CCDC3Q9BQI4 270 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 CENPHQ9H3R5 247 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 SRMSQ9H3Y6 488 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 EPB41L1Q9H4G0 881 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 PARVBQ9HBI1 364 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 RUVBL2Q9Y230 463 aaKnown RBP10.01□□□□□ -0.81
SKA1-204ENST00000488454 APOBEC2Q9Y235 224 aaKnown RBP10.01□□□□□ -0.81
SKA1-204ENST00000488454 LAMA1P25391 3075 aa10.01□□□□□ -0.81
SKA1-204ENST00000488454 TMEM131Q92545 1883 aa10□□□□□ -0.81
SKA1-204ENST00000488454 LY6G6EA0A0G2JKS1 128 aa10□□□□□ -0.81
SKA1-204ENST00000488454 PRAMEF33A0A0G2JMD5 474 aa10□□□□□ -0.81
SKA1-204ENST00000488454 ZNF839A8K0R7 811 aa10□□□□□ -0.81
SKA1-204ENST00000488454 GFYI3L273 518 aa10□□□□□ -0.81
SKA1-204ENST00000488454 RGS16O15492 202 aaPredicted RBP10□□□□□ -0.81
SKA1-204ENST00000488454 RFPL3O75679 317 aa10□□□□□ -0.81
SKA1-204ENST00000488454 UBXN7O94888 489 aa10□□□□□ -0.81
SKA1-204ENST00000488454 KLHL2O95198 593 aa10□□□□□ -0.81
SKA1-204ENST00000488454 TSPAN12O95859 305 aa10□□□□□ -0.81
SKA1-204ENST00000488454 ENO2P09104 434 aaPredicted RBP10□□□□□ -0.81
SKA1-204ENST00000488454 MYZAPP0CAP1 466 aa10□□□□□ -0.81
SKA1-204ENST00000488454 SLC35E2BP0CK96 405 aa10□□□□□ -0.81
SKA1-204ENST00000488454 SHMT2P34897 504 aa10□□□□□ -0.81
SKA1-204ENST00000488454 HSD17B2P37059 387 aa10□□□□□ -0.81
SKA1-204ENST00000488454 BDKRB1P46663 353 aa10□□□□□ -0.81
SKA1-204ENST00000488454 ACADVLP49748 655 aa10□□□□□ -0.81
SKA1-204ENST00000488454 NOVA1P51513 510 aaKnown RBP10□□□□□ -0.81
SKA1-204ENST00000488454 KPNA2P52292 529 aaKnown RBP10□□□□□ -0.81
SKA1-204ENST00000488454 EPHA4P54764 986 aa10□□□□□ -0.81
SKA1-204ENST00000488454 GPLD1P80108 840 aa10□□□□□ -0.81
SKA1-204ENST00000488454 SIM1P81133 766 aaPredicted RBP10□□□□□ -0.81
SKA1-204ENST00000488454 ZNF844Q08AG5 666 aa10□□□□□ -0.81
SKA1-204ENST00000488454 PRKAA1Q13131 559 aa10□□□□□ -0.81
SKA1-204ENST00000488454 SP140Q13342 867 aa10□□□□□ -0.81
SKA1-204ENST00000488454 AMZ1Q400G9 498 aa10□□□□□ -0.81
SKA1-204ENST00000488454 PPM1JQ5JR12 505 aa10□□□□□ -0.81
SKA1-204ENST00000488454 PERM1Q5SV97 790 aa10□□□□□ -0.81
SKA1-204ENST00000488454 ZNF438Q7Z4V0 828 aa10□□□□□ -0.81
SKA1-204ENST00000488454 AMIGO1Q86WK6 493 aa10□□□□□ -0.81
SKA1-204ENST00000488454 ZNF761Q86XN6 746 aaPredicted RBP10□□□□□ -0.81
SKA1-204ENST00000488454 SPATA6LQ8N4H0 392 aa10□□□□□ -0.81
SKA1-204ENST00000488454 OR4E2Q8NGC2 313 aa10□□□□□ -0.81
SKA1-204ENST00000488454 OR52E1Q8NGJ3 308 aa10□□□□□ -0.81
SKA1-204ENST00000488454 OR9A1PQ8NGU1 263 aa10□□□□□ -0.81
SKA1-204ENST00000488454 WDR48Q8TAF3 677 aa10□□□□□ -0.81
SKA1-204ENST00000488454 STAG3L4Q8TBR4 150 aa10□□□□□ -0.81
SKA1-204ENST00000488454 ISL2Q96A47 359 aa10□□□□□ -0.81
SKA1-204ENST00000488454 NXNL1Q96CM4 212 aa10□□□□□ -0.81
SKA1-204ENST00000488454 SCYL1Q96KG9 808 aa10□□□□□ -0.81
SKA1-204ENST00000488454 UBXN10Q96LJ8 280 aa10□□□□□ -0.81
SKA1-204ENST00000488454 RAB11FIP5Q9BXF6 653 aa10□□□□□ -0.81
SKA1-204ENST00000488454 TBC1D10AQ9BXI6 508 aa10□□□□□ -0.81
SKA1-204ENST00000488454 SLC12A9Q9BXP2 914 aa10□□□□□ -0.81
SKA1-204ENST00000488454 STMN4Q9H169 189 aaPredicted RBP10□□□□□ -0.81
SKA1-204ENST00000488454 LRRN3Q9H3W5 708 aa10□□□□□ -0.81
SKA1-204ENST00000488454 TFB2MQ9H5Q4 396 aaKnown RBP10□□□□□ -0.81
SKA1-204ENST00000488454 SYNDIG1Q9H7V2 258 aa10□□□□□ -0.81
SKA1-204ENST00000488454 PCDHGA1Q9Y5H4 931 aa10□□□□□ -0.81
SKA1-204ENST00000488454 U3KQA8 63 aa10□□□□□ -0.81
SKA1-204ENST00000488454 FAM186AA6NE01 2351 aa10□□□□□ -0.81
SKA1-204ENST00000488454 SPAARA0A1B0GVQ0 90 aa9.99□□□□□ -0.81
SKA1-204ENST00000488454 A0A1W2PPM1 405 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms