RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 OCRLQ01968 901 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 BST1Q10588 318 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 CLCA4Q14CN2 919 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 PCBP2Q15366 365 aaKnown RBP eCLIP11.02□□□□□ -0.65
SND1-212ENST00000485871 UAP1L1Q3KQV9 507 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 UNC50Q53HI1 259 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 ZNF542PQ5EBM4 170 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 ZNF678Q5SXM1 525 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 MBOAT1Q6ZNC8 495 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 SLC22A9Q8IVM8 553 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 WDR75Q8IWA0 830 aaKnown RBP11.02□□□□□ -0.65
SND1-212ENST00000485871 KLHDC8AQ8IYD2 350 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 RGL4Q8IZJ4 473 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 LSMEM2Q8N112 164 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 FBXO39Q8N4B4 442 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 FITM2Q8N6M3 262 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 PTGR2Q8N8N7 351 aaPredicted RBP11.02□□□□□ -0.65
SND1-212ENST00000485871 PPP4R1Q8TF05 950 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 UBTD2Q8WUN7 234 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 PHF21BQ96EK2 531 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 MOCOSQ96EN8 888 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 INSM2Q96T92 566 aaPredicted RBP11.02□□□□□ -0.65
SND1-212ENST00000485871 SORT1Q99523 831 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 MENTQ9BUN1 341 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 LRRC61Q9BV99 259 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 GSTO2Q9H4Y5 243 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 NPHS2Q9NP85 383 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 PRDM8Q9NQV8 689 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 ACSS2Q9NR19 701 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 UTP6Q9NYH9 597 aaKnown RBP11.02□□□□□ -0.65
SND1-212ENST00000485871 SCHIP1Q9P0W5 487 aaPredicted RBP11.02□□□□□ -0.65
SND1-212ENST00000485871 TBC1D29Q9UFV1 150 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 ZFP69BQ9UJL9 534 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 PSMD13Q9UNM6 376 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 PCDHGA2Q9Y5H1 932 aa11.02□□□□□ -0.65
SND1-212ENST00000485871 A0A1B0GVT2 93 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 PRR5-ARHGAP8B1AHC4 643 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 TMEM114B3SHH9 223 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 SMIM24O75264 130 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 RASSF9O75901 435 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 SIX3O95343 332 aaPredicted RBP11.01□□□□□ -0.65
SND1-212ENST00000485871 CATP04040 527 aaKnown RBP11.01□□□□□ -0.65
SND1-212ENST00000485871 JUNDP17535 347 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 IMPDH1P20839 514 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 CYP2A7P20853 494 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 RPL10P27635 214 aaKnown RBP11.01□□□□□ -0.65
SND1-212ENST00000485871 GGT5P36269 586 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 ACTR1BP42025 376 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 SLC6A12P48065 614 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 AGTR2P50052 363 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 BLKP51451 505 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 AFF3P51826 1226 aaKnown RBP11.01□□□□□ -0.65
SND1-212ENST00000485871 NAGLUP54802 743 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 AP1S2P56377 157 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 ACTR1AP61163 376 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 NCALDP61601 193 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 HERVK_113P63132 956 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 PFKFB4Q16877 469 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 C18orf21Q32NC0 220 aaPredicted RBP11.01□□□□□ -0.65
SND1-212ENST00000485871 SULT1C3Q6IMI6 304 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 DUS1LQ6P1R4 473 aaKnown RBP11.01□□□□□ -0.65
SND1-212ENST00000485871 FRA10AC1Q70Z53 315 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 SUMF1Q8NBK3 374 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 OR5AR1Q8NGP9 310 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 SKA2Q8WVK7 121 aaPredicted RBP11.01□□□□□ -0.65
SND1-212ENST00000485871 STON2Q8WXE9 905 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 TFGQ92734 400 aaPredicted RBP11.01□□□□□ -0.65
SND1-212ENST00000485871 KLHL29Q96CT2 875 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 ERP27Q96DN0 273 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 PKP4Q99569 1192 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 ERVK-6Q9BXR3 956 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 DRC3Q9H069 523 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 OSGEPL1Q9H4B0 414 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 ZNF395Q9H8N7 513 aaPredicted RBP11.01□□□□□ -0.65
SND1-212ENST00000485871 ERVMER34-1Q9H9K5 563 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 SLC40A1Q9NP59 571 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 CD274Q9NZQ7 290 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 APOBEC3BQ9UH17 382 aaKnown RBP11.01□□□□□ -0.65
SND1-212ENST00000485871 HAO1Q9UJM8 370 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 OTOGLQ3ZCN5 2332 aa11.01□□□□□ -0.65
SND1-212ENST00000485871 DCDC2BA2VCK2 349 aa11□□□□□ -0.65
SND1-212ENST00000485871 NCF1BA6NI72 391 aaPredicted RBP11□□□□□ -0.65
SND1-212ENST00000485871 NCF1CA8MVU1 366 aaPredicted RBP11□□□□□ -0.65
SND1-212ENST00000485871 E2F3O00716 465 aa11□□□□□ -0.65
SND1-212ENST00000485871 NPHS1O60500 1241 aa11□□□□□ -0.65
SND1-212ENST00000485871 CCDC22O60826 627 aa11□□□□□ -0.65
SND1-212ENST00000485871 GUCA1CO95843 209 aa11□□□□□ -0.65
SND1-212ENST00000485871 ANXA5P08758 320 aa11□□□□□ -0.65
SND1-212ENST00000485871 SLC35G4P0C7Q5 338 aa11□□□□□ -0.65
SND1-212ENST00000485871 ERGP11308 486 aa11□□□□□ -0.65
SND1-212ENST00000485871 MTHFD1P11586 935 aaKnown RBP11□□□□□ -0.65
SND1-212ENST00000485871 F3P13726 295 aa11□□□□□ -0.65
SND1-212ENST00000485871 GFAPP14136 432 aa11□□□□□ -0.65
SND1-212ENST00000485871 NCF1P14598 390 aaPredicted RBP11□□□□□ -0.65
SND1-212ENST00000485871 IMPA1P29218 277 aa11□□□□□ -0.65
SND1-212ENST00000485871 EEF1DP29692 281 aaKnown RBP11□□□□□ -0.65
SND1-212ENST00000485871 CCR10P46092 362 aa11□□□□□ -0.65
SND1-212ENST00000485871 ILF3Q12906 894 aaKnown RBP eCLIP11□□□□□ -0.65
SND1-212ENST00000485871 RIPK1Q13546 671 aa11□□□□□ -0.65
SND1-212ENST00000485871 RCN2Q14257 317 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms