RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PRSS42Q7Z5A4 293 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 ARHGAP22Q7Z5H3 698 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 ADGRF3Q8IZF5 1079 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 C2orf73Q8N5S3 287 aaPredicted RBP11.48□□□□□ -0.57
HPS4-214ENST00000485842 MAGEC3Q8TD91 643 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 RAD51AP1Q96B01 352 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 PPM1MQ96MI6 270 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 MCMBPQ9BTE3 642 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 TMEM121BQ9BXQ6 578 aaPredicted RBP11.48□□□□□ -0.57
HPS4-214ENST00000485842 RAB33BQ9H082 229 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 ANKZF1Q9H8Y5 726 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 CAB39LQ9H9S4 337 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 SPHK1Q9NYA1 384 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 ACTR10Q9NZ32 417 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 PDP2Q9P2J9 529 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 POMT2Q9UKY4 750 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 ADAMTS20P59510 1910 aa11.48□□□□□ -0.57
HPS4-214ENST00000485842 A0A087WUV0 522 aaPredicted RBP11.47□□□□□ -0.57
HPS4-214ENST00000485842 ISM1B1AKI9 464 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 MATN2O00339 956 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 RASGRF2O14827 1237 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 PHGDHO43175 533 aaKnown RBP11.47□□□□□ -0.57
HPS4-214ENST00000485842 TNFSF15O95150 251 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 ANKRD34CP0C6C1 535 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 UGT2B7P16662 529 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 ZNF37AP17032 561 aaPredicted RBP11.47□□□□□ -0.57
HPS4-214ENST00000485842 MAP4P27816 1152 aaKnown RBP11.47□□□□□ -0.57
HPS4-214ENST00000485842 TNFRSF8P28908 595 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 RBMS1P29558 406 aaKnown RBP11.47□□□□□ -0.57
HPS4-214ENST00000485842 LSSP48449 732 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 ARL4DP49703 201 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 PMS2P54278 862 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 POU4F1Q01851 419 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 ILF2Q12905 390 aaKnown RBP11.47□□□□□ -0.57
HPS4-214ENST00000485842 TSTA3Q13630 321 aaPredicted RBP11.47□□□□□ -0.57
HPS4-214ENST00000485842 BMPR2Q13873 1038 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 USP10Q14694 798 aaKnown RBP11.47□□□□□ -0.57
HPS4-214ENST00000485842 CYHR1Q6ZMK1 362 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 UBE2R2Q712K3 238 aaPredicted RBP11.47□□□□□ -0.57
HPS4-214ENST00000485842 TRIM73Q86UV7 250 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 CEP97Q8IW35 865 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 RAB42Q8N4Z0 105 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 OR9A1PQ8NGU1 263 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 OR2L8Q8NGY9 312 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 ASB11Q8WXH4 323 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 TSPAN17Q96FV3 270 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 CD180Q99467 661 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 GPR22Q99680 433 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 RAB11FIP5Q9BXF6 653 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 KLHL25Q9H0H3 589 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 ZNF768Q9H5H4 540 aaKnown RBP11.47□□□□□ -0.57
HPS4-214ENST00000485842 CCDC86Q9H6F5 360 aaKnown RBP11.47□□□□□ -0.57
HPS4-214ENST00000485842 GPAMQ9HCL2 828 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 OCIAD1Q9NX40 245 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 SOHLH2Q9NX45 425 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 OR6C2Q9NZP2 312 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 PCDHGA8Q9Y5G5 932 aa11.47□□□□□ -0.57
HPS4-214ENST00000485842 IGHV5-51A0A0C4DH38 117 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 NPEPPSL1A6NEC2 478 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 POC1B-GALNT4F8VUJ3 575 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 TOX3O15405 576 aaPredicted RBP11.46□□□□□ -0.57
HPS4-214ENST00000485842 ZBTB14O43829 449 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 TSPAN12O95859 305 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 C8GP07360 202 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 ITGA2BP08514 1039 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 PVRP15151 417 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 STMN1P16949 149 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 CYP2A7P20853 494 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 PRDX3P30048 256 aaKnown RBP11.46□□□□□ -0.57
HPS4-214ENST00000485842 PEBP1P30086 187 aaKnown RBP11.46□□□□□ -0.57
HPS4-214ENST00000485842 TUBB4BP68371 445 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 SP140Q13342 867 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 SPESP1Q6UW49 350 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 TMEM207Q6UWW9 146 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 TRMT10CQ7L0Y3 403 aaKnown RBP11.46□□□□□ -0.57
HPS4-214ENST00000485842 CMC1Q7Z7K0 106 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 LSMEM2Q8N112 164 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 NKAPQ8N5F7 415 aaKnown RBP11.46□□□□□ -0.57
HPS4-214ENST00000485842 EIF1ADQ8N9N8 165 aaKnown RBP11.46□□□□□ -0.57
HPS4-214ENST00000485842 LINC01555Q8NAE3 123 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 DENND1AQ8TEH3 1009 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 ZCCHC14Q8WYQ9 949 aaKnown RBP11.46□□□□□ -0.57
HPS4-214ENST00000485842 UBXN4Q92575 508 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 PRR11Q96HE9 360 aaPredicted RBP11.46□□□□□ -0.57
HPS4-214ENST00000485842 PAFAH2Q99487 392 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 PKP4Q99569 1192 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 CTRCQ99895 268 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 MENTQ9BUN1 341 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 FUT8Q9BYC5 575 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 UNKQ9C0B0 810 aaKnown RBP11.46□□□□□ -0.57
HPS4-214ENST00000485842 SYTL2Q9HCH5 934 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 SLC39A1Q9NY26 324 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 SPATA7Q9P0W8 599 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 LNPEPQ9UIQ6 1025 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 ADAMTS6Q9UKP5 1117 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 IKBKGQ9Y6K9 419 aa11.46□□□□□ -0.57
HPS4-214ENST00000485842 ANKRD12Q6UB98 2062 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 EXOC1LA0A1B0GW35 172 aa11.45□□□□□ -0.58
HPS4-214ENST00000485842 PABPN1LA6NDY0 278 aaKnown RBP11.45□□□□□ -0.58
HPS4-214ENST00000485842 SLC9B1P1A6NJY1 282 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms