RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 ZFHX4Q86UP3 3567 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 UNC13CQ8NB66 2214 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 A0A087WV48 116 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 RRP8O43159 456 aaKnown RBP10.53□□□□□ -0.72
DDX56-212ENST00000485367 DNAJA2O60884 412 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 OR6B1O95007 311 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 MMP2P08253 660 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 RBP3P10745 1247 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 ZNF30P17039 623 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 TEAD1P28347 426 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 LSSP48449 732 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 STC1P52823 247 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 DPTQ07507 201 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 SPIDRQ14159 915 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 TFDP2Q14188 446 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 NOMO1Q15155 1222 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 TLR1Q15399 786 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 NADK2Q4G0N4 442 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 METTL21CQ5VZV1 264 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 LRRC69Q6ZNQ3 347 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 SFTPA2Q8IWL1 248 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 CTAGE3PQ8IX95 158 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 Q8N9G6 341 aaPredicted RBP10.53□□□□□ -0.72
DDX56-212ENST00000485367 FAM71DQ8N9W8 422 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 WDR48Q8TAF3 677 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 PTCD2Q8WV60 388 aaKnown RBP10.53□□□□□ -0.72
DDX56-212ENST00000485367 STON2Q8WXE9 905 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 DLG3Q92796 817 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 BIRC8Q96P09 236 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 RIOK2Q9BVS4 552 aaKnown RBP10.53□□□□□ -0.72
DDX56-212ENST00000485367 POLR1BQ9H9Y6 1135 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 SAE1Q9UBE0 346 aaPredicted RBP10.53□□□□□ -0.72
DDX56-212ENST00000485367 ZC3H7BQ9UGR2 993 aaKnown RBP10.53□□□□□ -0.72
DDX56-212ENST00000485367 LAMA5O15230 3695 aa10.53□□□□□ -0.72
DDX56-212ENST00000485367 COL27A1Q8IZC6 1860 aaPredicted RBP10.53□□□□□ -0.72
DDX56-212ENST00000485367 CELSR3Q9NYQ7 3312 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 C1orf232A0A0U1RR37 186 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 FAM159BA6NKW6 160 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 SLC22A2O15244 555 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 GLRA3O75311 464 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 PGM3O95394 542 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 CLDN7O95471 211 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 FUCA1P04066 466 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 PROCP04070 461 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 SERPINE1P05121 402 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 RPLP0P05388 317 aaKnown RBP10.52□□□□□ -0.72
DDX56-212ENST00000485367 FAM58BPP0C7Q3 252 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 KITP10721 976 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 ITGAXP20702 1163 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 EIF2S3P41091 472 aaKnown RBP10.52□□□□□ -0.72
DDX56-212ENST00000485367 CCL7P80098 99 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 ILF3Q12906 894 aaKnown RBP eCLIP10.52□□□□□ -0.72
DDX56-212ENST00000485367 NAB1Q13506 487 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 INSCQ1MX18 579 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 LRRC36Q1X8D7 754 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 C3orf38Q5JPI3 329 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 CES4AQ5XG92 561 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 DHRS4L2Q6PKH6 230 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 ADAMTSL4Q6UY14 1074 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 ZNF765Q7L2R6 523 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 KDELC2Q7Z4H8 507 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 PDZD3Q86UT5 571 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 TICAM1Q8IUC6 712 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 ERI1Q8IV48 349 aaKnown RBP10.52□□□□□ -0.72
DDX56-212ENST00000485367 NRSN1Q8IZ57 195 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 GPR156Q8NFN8 814 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 AGAP2Q99490 1192 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 ARPC5LQ9BPX5 153 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 EBF4Q9BQW3 602 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 MLPHQ9BV36 600 aaPredicted RBP10.52□□□□□ -0.72
DDX56-212ENST00000485367 ADGRE3Q9BY15 652 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 GSDMCQ9BYG8 508 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 SATB2Q9UPW6 733 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 SLC17A4Q9Y2C5 497 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 DNAJC16Q9Y2G8 782 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 ENTPD2Q9Y5L3 495 aa10.52□□□□□ -0.72
DDX56-212ENST00000485367 ANKRD66B4E2M5 251 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 INPP4BO15327 924 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 NOBOXO60393 691 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 TRMUO75648 421 aaKnown RBP10.52□□□□□ -0.73
DDX56-212ENST00000485367 PIAS1O75925 651 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 SOD1P00441 154 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 ITPKBP27987 946 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 SLC1A6P48664 564 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 GALNT3Q14435 633 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 PCSK7Q16549 785 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 C14orf28Q4W4Y0 310 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 FASTKD1Q53R41 847 aaKnown RBP10.52□□□□□ -0.73
DDX56-212ENST00000485367 CERCAMQ5T4B2 595 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 TEDDM1Q5T9Z0 273 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 PDPK2PQ6A1A2 396 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 OGFOD3Q6PK18 319 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 C16orf89Q6UX73 402 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 DEFB107AQ8IZN7 70 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 LSMEM2Q8N112 164 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 OR6C4Q8NGE1 309 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 ZFP28Q8NHY6 868 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 SNIP1Q8TAD8 396 aaKnown RBP10.52□□□□□ -0.73
DDX56-212ENST00000485367 GSDMBQ8TAX9 411 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 GPBAR1Q8TDU6 330 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms