RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 UBXN8O00124 270 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 MYO1CO00159 1063 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 TYROBPO43914 113 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 SH3BP5O60239 455 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 KDM1AO60341 852 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 GFRA3O60609 400 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 SUPT3HO75486 399 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 LDOC1O95751 146 aaPredicted RBP11.89□□□□□ -0.51
SDC1-206ENST00000482879 S100BP04271 92 aaPredicted RBP11.89□□□□□ -0.51
SDC1-206ENST00000482879 GLB1P16278 677 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 RPA3P35244 121 aaPredicted RBP11.89□□□□□ -0.51
SDC1-206ENST00000482879 AP1S2P56377 157 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 DAB2P98082 770 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 GPS2Q13227 327 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 GPR18Q14330 331 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 GRB7Q14451 532 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 PLCL1Q15111 1095 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 TGFBIQ15582 683 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 PPP1R3AQ16821 1122 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 PROX2Q3B8N5 592 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 CCDC153Q494R4 210 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 HSP90B2PQ58FF3 399 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 MBOAT1Q6ZNC8 495 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 ZNF761Q86XN6 746 aaPredicted RBP11.89□□□□□ -0.51
SDC1-206ENST00000482879 NAXDQ8IW45 347 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 RAB42Q8N4Z0 105 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 CCDC63Q8NA47 563 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 OR6C4Q8NGE1 309 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 OR52E1Q8NGJ3 308 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 TCP10LQ8TDR4 215 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 LCN9Q8WX39 176 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 JPH3Q8WXH2 748 aaPredicted RBP11.89□□□□□ -0.51
SDC1-206ENST00000482879 CNDP2Q96KP4 475 aaKnown RBP11.89□□□□□ -0.51
SDC1-206ENST00000482879 CCDC138Q96M89 665 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 SLC38A3Q99624 504 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 EGFL8Q99944 293 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.89□□□□□ -0.51
SDC1-206ENST00000482879 XKR8Q9H6D3 395 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 EVA1BQ9NVM1 165 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 CPSF2Q9P2I0 782 aaKnown RBP11.89□□□□□ -0.51
SDC1-206ENST00000482879 LNPEPQ9UIQ6 1025 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 EMCNQ9ULC0 261 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 RNF215Q9Y6U7 377 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 U3KQA8 63 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 DNAH14Q0VDD8 3507 aa11.89□□□□□ -0.51
SDC1-206ENST00000482879 COL5A1P20908 1838 aaPredicted RBP11.88□□□□□ -0.51
SDC1-206ENST00000482879 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.88□□□□□ -0.51
SDC1-206ENST00000482879 NCF1BA6NI72 391 aaPredicted RBP11.88□□□□□ -0.51
SDC1-206ENST00000482879 NCF1CA8MVU1 366 aaPredicted RBP11.88□□□□□ -0.51
SDC1-206ENST00000482879 TK2O00142 265 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 PRPF4O43172 522 aaKnown RBP eCLIP11.88□□□□□ -0.51
SDC1-206ENST00000482879 NUDT21O43809 227 aaKnown RBP11.88□□□□□ -0.51
SDC1-206ENST00000482879 PLIN3O60664 434 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 PROCP04070 461 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 ANXA5P08758 320 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 SBK3P0C264 359 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 TPBGLP0DKB5 382 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 NCF1P14598 390 aaPredicted RBP11.88□□□□□ -0.51
SDC1-206ENST00000482879 TAC1P20366 129 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 DUSP3P51452 185 aaPredicted RBP11.88□□□□□ -0.51
SDC1-206ENST00000482879 CDKL1Q00532 357 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 GUSBP11Q6P575 273 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 TMEM151AQ8N4L1 468 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 ARMC2Q8NEN0 867 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 OR4E2Q8NGC2 313 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 IL17FQ96PD4 163 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 FAM111AQ96PZ2 611 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 NRTNQ99748 197 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 SELENOSQ9BQE4 189 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 TBC1D10AQ9BXI6 508 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 SRMSQ9H3Y6 488 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 UCK1Q9HA47 277 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 MED4Q9NPJ6 270 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 NUDT4Q9NZJ9 180 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 SPATA7Q9P0W8 599 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 SLC17A7Q9P2U7 560 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 FTSJ1Q9UET6 329 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 HEATR5BQ9P2D3 2071 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 ZNF292O60281 2723 aa11.88□□□□□ -0.51
SDC1-206ENST00000482879 TMEM120BA0PK00 339 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 EME2A4GXA9 379 aaPredicted RBP11.87□□□□□ -0.51
SDC1-206ENST00000482879 LILRA5A6NI73 299 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 ZNF839A8K0R7 811 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 TARM1B6A8C7 271 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 SMIM24O75264 130 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 SLC16A8O95907 504 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 CKMT1AP12532 417 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 MTHFD2P13995 350 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 GFAPP14136 432 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 ALDH4A1P30038 563 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 HPDP32754 393 aaPredicted RBP11.87□□□□□ -0.51
SDC1-206ENST00000482879 SHMT2P34897 504 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 HSD17B2P37059 387 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 GPR3P46089 330 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 PPM1FP49593 454 aaPredicted RBP11.87□□□□□ -0.51
SDC1-206ENST00000482879 RAB28P51157 221 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 PNLIPRP1P54315 467 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 MPP2Q14168 576 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 PFKFB4Q16877 469 aa11.87□□□□□ -0.51
SDC1-206ENST00000482879 CDKL4Q5MAI5 379 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms