RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 PDAP1Q13442 181 aaKnown RBP20.26■□□□□ 0.83
SEC13-217ENST00000482647 GRB7Q14451 532 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 PAQR3Q6TCH7 311 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 BMPERQ8N8U9 685 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 CPNE1Q99829 537 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 RHOXF2Q9BQY4 288 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 DDA1Q9BW61 102 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 ASPSCR1Q9BZE9 553 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 RHOJQ9H4E5 214 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 FBXO8Q9NRD0 319 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 C1GALT1Q9NS00 363 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 ACTR10Q9NZ32 417 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 ZMIZ1Q9ULJ6 1067 aa20.26■□□□□ 0.83
SEC13-217ENST00000482647 CXorf49A8MYA2 514 aaPredicted RBP20.25■□□□□ 0.83
SEC13-217ENST00000482647 ESPNB1AK53 854 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 TAF4O00268 1085 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 RASGRF2O14827 1237 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 PIAS1O75925 651 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 ZBTB11O95625 1053 aaPredicted RBP20.25■□□□□ 0.83
SEC13-217ENST00000482647 CDH3P22223 829 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 FDXRP22570 491 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 ECHS1P30084 290 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 PKLRP30613 574 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 SLC5A2P31639 672 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 BDKRB1P46663 353 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 HSD11B2P80365 405 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 ST3GAL2Q16842 350 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 DCAF12Q5T6F0 453 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 CYHR1Q6ZMK1 362 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 CTAGE3PQ8IX95 158 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 SNIP1Q8TAD8 396 aaKnown RBP20.25■□□□□ 0.83
SEC13-217ENST00000482647 FBF1Q8TES7 1133 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 ASB11Q8WXH4 323 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 ELMO2Q96JJ3 720 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 SLC41A2Q96JW4 573 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 CIDEBQ9UHD4 219 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 LNPEPQ9UIQ6 1025 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 RAXQ9Y2V3 346 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 PCDHGA3Q9Y5H0 932 aa20.25■□□□□ 0.83
SEC13-217ENST00000482647 C9orf172C9J069 976 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 MAP3K7O43318 606 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 TLX3O43711 291 aaPredicted RBP20.24■□□□□ 0.83
SEC13-217ENST00000482647 ZBTB14O43829 449 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 PRAMEF10O60809 474 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 SAT1P21673 171 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 MAP4P27816 1152 aaKnown RBP20.24■□□□□ 0.83
SEC13-217ENST00000482647 PHBP35232 272 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 PCBP4P57723 403 aaKnown RBP20.24■□□□□ 0.83
SEC13-217ENST00000482647 IL2P60568 153 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 KIR2DS3Q14952 304 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 KBTBD12Q3ZCT8 623 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 CCSMST1Q4G0I0 132 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 SPESP1Q6UW49 350 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 PIWIL4Q7Z3Z4 852 aaKnown RBP20.24■□□□□ 0.83
SEC13-217ENST00000482647 OR2L8Q8NGY9 312 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 EEF1AKMT1Q8WVE0 214 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 SLC22A18Q96BI1 424 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 ZPBPQ9BS86 351 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 MCMBPQ9BTE3 642 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 MENTQ9BUN1 341 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 PITPNM3Q9BZ71 974 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 SIDT1Q9NXL6 827 aaKnown RBP20.24■□□□□ 0.83
SEC13-217ENST00000482647 SPHK1Q9NYA1 384 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 PCDHB11Q9Y5F2 797 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 APC2O95996 2303 aa20.24■□□□□ 0.83
SEC13-217ENST00000482647 KIF26BQ2KJY2 2108 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 FAM95CA0A1B0GW59 222 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 SLC9B1P1A6NJY1 282 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 ARHGEF33A8MVX0 844 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 ISM1B1AKI9 464 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 GFYI3L273 518 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 MYO1CO00159 1063 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 POLR1CO15160 346 aaPredicted RBP20.23■□□□□ 0.83
SEC13-217ENST00000482647 RRP8O43159 456 aaKnown RBP20.23■□□□□ 0.83
SEC13-217ENST00000482647 UGT2B7P16662 529 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 HSD17B2P37059 387 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 GP5P40197 560 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 FOXM1Q08050 763 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 NAB1Q13506 487 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 IL11RAQ14626 422 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 TMTC4Q5T4D3 741 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 ANKS6Q68DC2 871 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 CYB5D1Q6P9G0 228 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 CEACAM20Q6UY09 585 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 MYO1HQ8N1T3 1032 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 PPM1NQ8N819 430 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 LINC01555Q8NAE3 123 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 LRRN4CLQ8ND94 238 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 ZNF248Q8NDW4 579 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 OR9A1PQ8NGU1 263 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 LINGO1Q96FE5 620 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 VPS39Q96JC1 886 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 IL17FQ96PD4 163 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 TEFMQ96QE5 360 aaKnown RBP20.23■□□□□ 0.83
SEC13-217ENST00000482647 OR2A14Q96R47 310 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 OLFM1Q99784 485 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 TWSG1Q9GZX9 223 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 NINJ2Q9NZG7 142 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 SPATA7Q9P0W8 599 aa20.23■□□□□ 0.83
SEC13-217ENST00000482647 NFU1Q9UMS0 254 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms