RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 PRR32B1ATL7 298 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 XPNPEP2O43895 674 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 FGF17O60258 216 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 TBX10O75333 385 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 NR3C1P04150 777 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 FYNP06241 537 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 CCDC175P0C221 793 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 TSPY3P0CV98 308 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 TSPY8P0CW00 308 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 HSPA5P11021 654 aaKnown RBP3.58□□□□□ -1.84
CBX3-207ENST00000481300 ACP2P11117 423 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 ERCC2P18074 760 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 GNAZP19086 355 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 EPHA2P29317 976 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 NR2C2P49116 596 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 TSPY1Q01534 308 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 PNRC1Q12796 327 aaPredicted RBP3.58□□□□□ -1.84
CBX3-207ENST00000481300 ILF3Q12906 894 aaKnown RBP eCLIP3.58□□□□□ -1.841e-7■■■■□ 21.9
CBX3-207ENST00000481300 CAMK2DQ13557 499 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 TNIP1Q15025 636 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 ZRSR1Q15695 479 aaKnown RBP3.58□□□□□ -1.84
CBX3-207ENST00000481300 MDH1BQ5I0G3 518 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 CCNYL2Q5T2Q4 361 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 GRTP1Q5TC63 336 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 Q6ZTC4 211 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 DET1Q7L5Y6 550 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 CFAP206Q8IYR0 622 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 CPSF7Q8N684 471 aaKnown RBP3.58□□□□□ -1.84
CBX3-207ENST00000481300 LMNTD1Q8N9Z9 388 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 OR5M8Q8NGP6 311 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 RNF128Q8TEB7 428 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 ARSGQ96EG1 525 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 STAMBPL1Q96FJ0 436 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 ZNF354BQ96LW1 612 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 C17orf77Q96MU5 243 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 TRAF4Q9BUZ4 470 aaPredicted RBP3.58□□□□□ -1.84
CBX3-207ENST00000481300 GPR88Q9GZN0 384 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 TFB2MQ9H5Q4 396 aaKnown RBP3.58□□□□□ -1.84
CBX3-207ENST00000481300 ERVMER34-1Q9H9K5 563 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 ZBTB20Q9HC78 741 aaPredicted RBP3.58□□□□□ -1.84
CBX3-207ENST00000481300 ACKR4Q9NPB9 350 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 ECHDC1Q9NTX5 307 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 KCNG2Q9UJ96 466 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 AGLP35573 1532 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 PRDM15P57071 1507 aaPredicted RBP3.58□□□□□ -1.84
CBX3-207ENST00000481300 LMTK2Q8IWU2 1503 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 HECW2Q9P2P5 1572 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 DIP2CQ9Y2E4 1556 aa3.58□□□□□ -1.84
CBX3-207ENST00000481300 FAM172BPA6NC97 362 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 H7C0S8 307 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 ABCC3O15438 1527 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 TOMM70O94826 608 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 DANCRP0C864 163 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 EEF1B2P24534 225 aaKnown RBP3.57□□□□□ -1.84
CBX3-207ENST00000481300 MARK3P27448 753 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 NOS1P29475 1434 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 SLC6A6P31641 620 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 THOP1P52888 689 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 PDX1P52945 283 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 RAD23AP54725 363 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 DLX5P56178 289 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 CX3CL1P78423 397 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 PHEXP78562 749 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 ARL16Q0P5N6 197 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 DMP1Q13316 513 aaPredicted RBP3.57□□□□□ -1.84
CBX3-207ENST00000481300 COG2Q14746 738 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 PTPRCAPQ14761 206 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 FAM133BQ5BKY9 247 aaKnown RBP3.57□□□□□ -1.84
CBX3-207ENST00000481300 FAM76BQ5HYJ3 339 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 KRBOX4Q5JUW0 171 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 RBPMS2Q6ZRY4 209 aaKnown RBP3.57□□□□□ -1.84
CBX3-207ENST00000481300 ZBTB49Q6ZSB9 765 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 SPATA31E1Q6ZUB1 1445 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 ZNF771Q7L3S4 317 aaPredicted RBP3.57□□□□□ -1.84
CBX3-207ENST00000481300 SLC26A9Q7LBE3 791 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 CCDC186Q7Z3E2 898 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 MFN1Q8IWA4 741 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 XXYLT1Q8NBI6 393 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 SLC4A11Q8NBS3 891 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 CCDC107Q8WV48 283 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 TNRQ92752 1358 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 LINC00615Q96LM1 132 aaPredicted RBP3.57□□□□□ -1.84
CBX3-207ENST00000481300 SGK494Q96LW2 274 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 INPP4AQ96PE3 977 aaPredicted RBP3.57□□□□□ -1.84
CBX3-207ENST00000481300 MYADMQ96S97 322 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 BTBD10Q9BSF8 475 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 TRMT61BQ9BVS5 477 aaKnown RBP3.57□□□□□ -1.84
CBX3-207ENST00000481300 NUP85Q9BW27 656 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 PFDN4Q9NQP4 134 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 ZFP57Q9NU63 452 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 PRMT7Q9NVM4 692 aaPredicted RBP3.57□□□□□ -1.84
CBX3-207ENST00000481300 CNTLNQ9NXG0 1405 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 C5AR2Q9P296 337 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 CPSF3Q9UKF6 684 aaKnown RBP3.57□□□□□ -1.84
CBX3-207ENST00000481300 SLC7A7Q9UM01 511 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 PADI2Q9Y2J8 665 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 CCL27Q9Y4X3 112 aa3.57□□□□□ -1.84
CBX3-207ENST00000481300 CROCC2H7BZ55 1655 aa3.56□□□□□ -1.84
CBX3-207ENST00000481300 GCC2Q8IWJ2 1684 aa3.56□□□□□ -1.84
CBX3-207ENST00000481300 VWDEQ8N2E2 1590 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms