RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 FAM228BP0C875 321 aa12.84□□□□□ -0.35
NDC1-202ENST00000480952 ESRRAP11474 423 aaPredicted RBP12.84□□□□□ -0.35
NDC1-202ENST00000480952 ITGAXP20702 1163 aa12.84□□□□□ -0.35
NDC1-202ENST00000480952 PBX1P40424 430 aa12.84□□□□□ -0.35
NDC1-202ENST00000480952 RBPJQ06330 500 aa12.84□□□□□ -0.35
NDC1-202ENST00000480952 RBM43Q6ZSC3 357 aaKnown RBP12.84□□□□□ -0.35
NDC1-202ENST00000480952 CCDC110Q8TBZ0 833 aa12.84□□□□□ -0.35
NDC1-202ENST00000480952 HEXDCQ8WVB3 486 aa12.84□□□□□ -0.35
NDC1-202ENST00000480952 ULK4Q96C45 1275 aa12.84□□□□□ -0.35
NDC1-202ENST00000480952 SPSB2Q99619 263 aa12.84□□□□□ -0.35
NDC1-202ENST00000480952 FSD1LQ9BXM9 530 aa12.84□□□□□ -0.35
NDC1-202ENST00000480952 FAM96AQ9H5X1 160 aa12.84□□□□□ -0.35
NDC1-202ENST00000480952 SEMA3GQ9NS98 782 aa12.84□□□□□ -0.35
NDC1-202ENST00000480952 EURLQ9NYK6 297 aa12.84□□□□□ -0.35
NDC1-202ENST00000480952 KLHL8Q9P2G9 620 aaPredicted RBP12.84□□□□□ -0.35
NDC1-202ENST00000480952 UVRAGQ9P2Y5 699 aa12.84□□□□□ -0.35
NDC1-202ENST00000480952 LCMT1Q9UIC8 334 aa12.84□□□□□ -0.35
NDC1-202ENST00000480952 NXT1Q9UKK6 140 aaKnown RBP12.84□□□□□ -0.35
NDC1-202ENST00000480952 CCDC88CQ9P219 2028 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 C3orf70A6NLC5 250 aaPredicted RBP12.83□□□□□ -0.36
NDC1-202ENST00000480952 ISM1B1AKI9 464 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 HPP00738 406 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 CRYABP02511 175 aaKnown RBP12.83□□□□□ -0.36
NDC1-202ENST00000480952 SERPING1P05155 500 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 TNFSF10P50591 281 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 SMSP52788 366 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 WASHC5Q12768 1159 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 RPA4Q13156 261 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 MPP3Q13368 585 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 TAF1AQ15573 450 aaPredicted RBP12.83□□□□□ -0.36
NDC1-202ENST00000480952 ODF2Q5BJF6 829 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 BZW1Q7L1Q6 419 aaKnown RBP12.83□□□□□ -0.36
NDC1-202ENST00000480952 PID1Q7Z2X4 250 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 VSIG1Q86XK7 387 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 MCATQ8IVS2 390 aaKnown RBP12.83□□□□□ -0.36
NDC1-202ENST00000480952 KBTBD2Q8IY47 623 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 OR5AR1Q8NGP9 310 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 CHTF18Q8WVB6 975 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 TFB1MQ8WVM0 346 aaKnown RBP12.83□□□□□ -0.36
NDC1-202ENST00000480952 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.83□□□□□ -0.36
NDC1-202ENST00000480952 OXNAD1Q96HP4 312 aaPredicted RBP12.83□□□□□ -0.36
NDC1-202ENST00000480952 FCRL5Q96RD9 977 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.83□□□□□ -0.36
NDC1-202ENST00000480952 SLC26A1Q9H2B4 701 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 ZNF160Q9HCG1 818 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 OR6C2Q9NZP2 312 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 PTGFRNQ9P2B2 879 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 CTSFQ9UBX1 484 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 ASF1AQ9Y294 204 aa12.83□□□□□ -0.36
NDC1-202ENST00000480952 TDRKHQ9Y2W6 561 aaKnown RBP12.83□□□□□ -0.36
NDC1-202ENST00000480952 C5orf60A6NFR6 353 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 C19orf84I3L1E1 186 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 USP1O94782 785 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 RASAL1O95294 804 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 ONECUT2O95948 504 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 AGTP01019 485 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 UQCRHP07919 91 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 ACPPP15309 386 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 ITGALP20701 1170 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 AGAP20933 346 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 MST1P26927 711 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 NR2C2P49116 596 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 FANCCQ00597 558 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 SRSF11Q05519 484 aaKnown RBP12.82□□□□□ -0.36
NDC1-202ENST00000480952 MESDQ14696 234 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 COX15Q7KZN9 410 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 CEP97Q8IW35 865 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 FAM20CQ8IXL6 584 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 DNAJB8Q8NHS0 232 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 FLVCR1-AS1Q8TAF5 88 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 SYN2Q92777 582 aaPredicted RBP12.82□□□□□ -0.36
NDC1-202ENST00000480952 HAS2Q92819 552 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 RNF25Q96BH1 459 aaPredicted RBP12.82□□□□□ -0.36
NDC1-202ENST00000480952 MTFMTQ96DP5 389 aaKnown RBP12.82□□□□□ -0.36
NDC1-202ENST00000480952 C14orf79Q96F83 325 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 CUTCQ9NTM9 273 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 ABI3Q9P2A4 366 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 SAE1Q9UBE0 346 aaPredicted RBP12.82□□□□□ -0.36
NDC1-202ENST00000480952 POLG2Q9UHN1 485 aa12.82□□□□□ -0.36
NDC1-202ENST00000480952 AGAP14A8MT82 685 aa12.81□□□□□ -0.36
NDC1-202ENST00000480952 MAP2K7O14733 419 aa12.81□□□□□ -0.36
NDC1-202ENST00000480952 DSCR3O14972 297 aa12.81□□□□□ -0.36
NDC1-202ENST00000480952 F10P00742 488 aa12.81□□□□□ -0.36
NDC1-202ENST00000480952 KRT1P04264 644 aa12.81□□□□□ -0.36
NDC1-202ENST00000480952 H2AFZP0C0S5 128 aa12.81□□□□□ -0.36
NDC1-202ENST00000480952 GCGRP47871 477 aa12.81□□□□□ -0.36
NDC1-202ENST00000480952 OR1D4P47884 311 aa12.81□□□□□ -0.36
NDC1-202ENST00000480952 CARSP49589 748 aaKnown RBP12.81□□□□□ -0.36
NDC1-202ENST00000480952 ADORA2A-AS1P86434 159 aa12.81□□□□□ -0.36
NDC1-202ENST00000480952 XIAPP98170 497 aa12.81□□□□□ -0.36
NDC1-202ENST00000480952 TLE4Q04727 773 aa12.81□□□□□ -0.36
NDC1-202ENST00000480952 KIR2DS3Q14952 304 aa12.81□□□□□ -0.36
NDC1-202ENST00000480952 ZNF658BQ4V348 819 aaPredicted RBP12.81□□□□□ -0.36
NDC1-202ENST00000480952 H2AFVQ71UI9 128 aa12.81□□□□□ -0.36
NDC1-202ENST00000480952 SNX20Q7Z614 316 aa12.81□□□□□ -0.36
NDC1-202ENST00000480952 ZNF567Q8N184 647 aa12.81□□□□□ -0.36
NDC1-202ENST00000480952 METTL27Q8N6F8 245 aaPredicted RBP12.81□□□□□ -0.36
NDC1-202ENST00000480952 BRIX1Q8TDN6 353 aaKnown RBP12.81□□□□□ -0.36
NDC1-202ENST00000480952 CTNNBL1Q8WYA6 563 aaPredicted RBP12.81□□□□□ -0.36
NDC1-202ENST00000480952 NAP1L5Q96NT1 182 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms