RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 C7orf72A4D263 438 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 MROH6A6NGR9 719 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 H7C0S8 307 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 AGPSO00116 658 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 TLR4O00206 839 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 RAD51BO15315 384 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 YKT6O15498 198 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 LDB2O43679 373 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 BUD23O43709 281 aaKnown RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 SRP72O76094 671 aaKnown RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 USP1O94782 785 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 SLC25A14O95258 325 aaPredicted RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 CER1O95813 267 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 POLBP06746 335 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 HOXC4P09017 264 aaPredicted RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 RHOXF2BP0C7M4 288 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 RALBP11234 206 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 CPEP16870 476 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 BPIP17213 487 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 PGAM1P18669 254 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 IVDP26440 423 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 MC4RP32245 332 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 BCL6P41182 706 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 GRIA1P42261 906 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 ARRB1P49407 418 aaPredicted RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 ACADVLP49748 655 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 BLKP51451 505 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 CLCN2P51788 898 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 ZNF140P52738 457 aaPredicted RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 PLTPP55058 493 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 CLDN2P57739 230 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 KIAA1024LP59773 190 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 RPL11P62913 178 aaKnown RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 TMPRSS15P98073 1019 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 NHLH1Q02575 133 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 CACNG1Q06432 222 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 PEX6Q13608 980 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 THOC5Q13769 683 aaKnown RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 PDE1CQ14123 709 aaPredicted RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 FGL2Q14314 439 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 ITIH4Q14624 930 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 NFATC4Q14934 902 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 PTPRRQ15256 657 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 GPR33Q49SQ1 333 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 FASTKD1Q53R41 847 aaKnown RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 ZRANB3Q5FWF4 1079 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 AARS2Q5JTZ9 985 aaKnown RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 LDLRAP1Q5SW96 308 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 HENMT1Q5T8I9 393 aaKnown RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 HLA-DQA1Q5Y7H0 255 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 AFTPHQ6ULP2 937 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 ENPP7Q6UWV6 458 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 FAM151BQ6UXP7 276 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 MACC1Q6ZN28 852 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 GCNT7Q6ZNI0 430 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 Q6ZSR6 202 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 ABI3BPQ7Z7G0 1075 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 CAND1Q86VP6 1230 aaKnown RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 HEATR4Q86WZ0 1026 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 LMNTD2Q8IXW0 634 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 SUMF1Q8NBK3 374 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 NOA1Q8NC60 698 aaKnown RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 GPR26Q8NDV2 337 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 ZNF398Q8TD17 642 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 CALML6Q8TD86 181 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 ZNF473Q8WTR7 871 aaKnown RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 IFT81Q8WYA0 676 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 NCSTNQ92542 709 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 ART4Q93070 314 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 GLYATL1Q969I3 302 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 STAMBPL1Q96FJ0 436 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 DCUN1D1Q96GG9 259 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 HIC2Q96JB3 615 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 MAP6Q96JE9 813 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 DNAJC1Q96KC8 554 aaKnown RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 WDR92Q96MX6 357 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 VPS35Q96QK1 796 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 SMIM14Q96QK8 99 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 KLF6Q99612 283 aaPredicted RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 RHOXF2Q9BQY4 288 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 APOOQ9BUR5 198 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 KIFC1Q9BW19 673 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 TRIM4Q9C037 500 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 ASB8Q9H765 288 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 IPPKQ9H8X2 491 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 MBNL1Q9NR56 388 aaKnown RBP6.09□□□□□ -1.43
SF3B1-209ENST00000479532 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.09□□□□□ -1.433e-7■■□□□ 14.3
SF3B1-209ENST00000479532 SYBUQ9NX95 663 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 QPCTLQ9NXS2 382 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 MOSPD1Q9UJG1 213 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 ANKRD6Q9Y2G4 727 aa6.09□□□□□ -1.43
SF3B1-209ENST00000479532 A0A0C4DFX4 3053 aa6.09□□□□□ -1.44
SF3B1-209ENST00000479532 A0A0U1RQS6 177 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 A0A1B0GVT2 93 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 A0A1W2PR77 199 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 CCDC78A2IDD5 438 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 POM121BA6NF01 834 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 C10orf142B7Z368 130 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 GPR89AB7ZAQ6 455 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 QSOX1O00391 747 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms