RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ARPC2O15144 300 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 CD1DP15813 335 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 TLX1P31314 330 aaPredicted RBP14.05□□□□□ -0.16
COL20A1-206ENST00000479501 PSMD8P48556 350 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 UFM1P61960 85 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 ADAM17P78536 824 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 CCNYL2Q5T2Q4 361 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 KLHDC10Q6PID8 442 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 KCTD8Q6ZWB6 473 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 RHEBL1Q8TAI7 183 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 RHBGQ9H310 441 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 TPK1Q9H3S4 243 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 CSNK1G1Q9HCP0 422 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 RGS17Q9UGC6 210 aaPredicted RBP14.05□□□□□ -0.16
COL20A1-206ENST00000479501 CNOT6Q9ULM6 557 aaKnown RBP14.05□□□□□ -0.16
COL20A1-206ENST00000479501 SERPINB7O75635 380 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 STC2O76061 302 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 SMIM11AP58511 58 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 CSNK2BP67870 215 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 GET4Q7L5D6 327 aaPredicted RBP14.04□□□□□ -0.16
COL20A1-206ENST00000479501 GALNT5Q7Z7M9 940 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 LRRC17Q8N6Y2 441 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 PHF12Q96QT6 1004 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 CRISPLD1Q9H336 500 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 RASSF1Q9NS23 344 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 AREL1O15033 823 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 FADS2O95864 444 aaKnown RBP14.04□□□□□ -0.16
COL20A1-206ENST00000479501 RAP2AP10114 183 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 IGFBP5P24593 272 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 VARSP26640 1264 aaKnown RBP14.04□□□□□ -0.16
COL20A1-206ENST00000479501 ARSIQ5FYB1 569 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 BRAT1Q6PJG6 821 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 IKBIPQ70UQ0 350 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 RAD51AP1Q96B01 352 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 NODALQ96S42 347 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 FEM1AQ9BSK4 669 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 ING3Q9NXR8 418 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 IFT80Q9P2H3 777 aaPredicted RBP14.04□□□□□ -0.16
COL20A1-206ENST00000479501 RPS6KB2Q9UBS0 482 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 TLL2Q9Y6L7 1015 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 RREB1Q92766 1687 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 TBC1D3DA0A087WVF3 549 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 TBC1D3IA0A087WXS9 549 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 TBC1D3EA0A087X179 549 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 TBC1D3KA0A087X1G2 549 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 TBC1D3FA6NER0 549 aaPredicted RBP14.04□□□□□ -0.16
COL20A1-206ENST00000479501 TBC1D3LB9A6J9 549 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 CACNB4O00305 520 aaPredicted RBP14.04□□□□□ -0.16
COL20A1-206ENST00000479501 EI24O14681 340 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 DYRK3O43781 588 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 OR1I1O60431 355 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 TBC1D3HP0C7X1 549 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 EFNA1P20827 205 aaPredicted RBP14.04□□□□□ -0.16
COL20A1-206ENST00000479501 HTR1BP28222 390 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 GGT5P36269 586 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 NUP62P37198 522 aaPredicted RBP14.04□□□□□ -0.16
COL20A1-206ENST00000479501 AGTR2P50052 363 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 AP1S2P56377 157 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 CREB5Q02930 508 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 DDI2Q5TDH0 399 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 TBC1D3GQ6DHY5 549 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 TBC1D3CQ6IPX1 549 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 TBC1D3Q8IZP1 549 aaPredicted RBP14.04□□□□□ -0.16
COL20A1-206ENST00000479501 PDP1Q9P0J1 537 aaPredicted RBP14.04□□□□□ -0.16
COL20A1-206ENST00000479501 ING4Q9UNL4 249 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 GTF2A1LQ9UNN4 478 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 ZNF232Q9UNY5 417 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 SLC9A8Q9Y2E8 581 aa14.04□□□□□ -0.16
COL20A1-206ENST00000479501 SAGE2PA6NJ88 616 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 MAGEB17A8MXT2 336 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 BTN3A3O00478 584 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 ERN1O75460 977 aaKnown RBP14.03□□□□□ -0.16
COL20A1-206ENST00000479501 ANGPTL1O95841 491 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 OLR1P78380 273 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 DPY19L1Q2PZI1 675 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 PLEKHG6Q3KR16 790 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 RAB41Q5JT25 222 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 CLLU1OSQ5K130 101 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 LRRC66Q68CR7 880 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 GOLGA7Q7Z5G4 137 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 TDP1Q9NUW8 608 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 TOR4AQ9NXH8 423 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 MSRAQ9UJ68 235 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 DHRS7Q9Y394 339 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 RWDD3Q9Y3V2 267 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 LOC730098B7Z3J9 87 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 G3V2L1 256 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 H3BSA7 217 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 OR10H3O60404 316 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 DNTTP04053 509 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 CCL5P13501 91 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 NOS3P29474 1203 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 GKP32189 559 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 ACADVLP49748 655 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 HNMTP50135 292 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 DIO3P55073 304 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 CDKN2DP55273 166 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 FCHO2Q0JRZ9 810 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 LINC01465Q8N7H1 131 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 RAB2BQ8WUD1 216 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms