RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 ICKQ9UPZ9 632 aa13.38□□□□□ -0.27
SOX2-OT-208ENST00000477928 CDYLQ9Y232 598 aa13.38□□□□□ -0.27
SOX2-OT-208ENST00000477928 TENM4Q6N022 2769 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 GSAPA4D1B5 854 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 FAM187AA6NFU0 413 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 SLC9B1P1A6NJY1 282 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 GOLGA8KD6RF30 607 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 GOLGA8TH3BQL2 631 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 EIF3FO00303 357 aaPredicted RBP13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 TERTO14746 1132 aaKnown RBP13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 NTRK1P04629 796 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 FURINP09958 794 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 ST6GAL1P15907 406 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 CASQ1P31415 396 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 RAB28P51157 221 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 EIF3BP55884 814 aaKnown RBP13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 TUBB4BP68371 445 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 C19orf57Q0VDD7 668 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 TUBB2AQ13885 445 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 FRG1Q14331 258 aaKnown RBP13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 CRTC2Q53ET0 693 aaPredicted RBP13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 SPANXN3Q5MJ09 141 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 FAM69BQ5VUD6 431 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 IZUMO3Q5VZ72 239 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 HIBCHQ6NVY1 386 aaPredicted RBP13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 FAM199XQ6PEV8 388 aaPredicted RBP13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 KIAA0408Q6ZU52 694 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 NEK10Q6ZWH5 1172 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 FAM20CQ8IXL6 584 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 RAB42Q8N4Z0 105 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 STARD8Q92502 1023 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 KCNJ9Q92806 393 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 EBNA1BP2Q99848 306 aaKnown RBP13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 TUBB2BQ9BVA1 445 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 CCDC68Q9H2F9 335 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 FGF21Q9NSA1 209 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 SPHK1Q9NYA1 384 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 IL1RAPL1Q9NZN1 696 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 CROTQ9UKG9 612 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 RARRES3Q9UL19 164 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 MAD1L1Q9Y6D9 718 aa13.37□□□□□ -0.27
SOX2-OT-208ENST00000477928 PIPSLA2A3N6 862 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 GOLGA8MH3BSY2 632 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 HCRTR1O43613 425 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 CTSBP07858 339 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 PKMP14618 531 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 CDH3P22223 829 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 PRDX3P30048 256 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 NFATC3Q12968 1075 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 ABRQ12979 859 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 GBX1Q14549 363 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 KIR2DS3Q14952 304 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 KYNUQ16719 465 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 TTLL9Q3SXZ7 439 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 CTSL3PQ5NE16 218 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 ZNF470Q6ECI4 717 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 LCN10Q6JVE6 187 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 C16orf46Q6P387 395 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 C6orf15Q6UXA7 325 aaPredicted RBP13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 CENPUQ71F23 418 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 CNTN4Q8IWV2 1026 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 KLHL7Q8IXQ5 586 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 ADGRF3Q8IZF5 1079 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 SLC38A9Q8NBW4 561 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 CT55Q8WUE5 264 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 KIAA1143Q96AT1 154 aaPredicted RBP13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 RAD51AP1Q96B01 352 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 MED8Q96G25 268 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 SNF8Q96H20 258 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 SLC45A3Q96JT2 553 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 ACTR10Q9NZ32 417 aa13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 TSR3Q9UJK0 312 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 RUVBL2Q9Y230 463 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 TLN1Q9Y490 2541 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-208ENST00000477928 SEC16AO15027 2179 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 E5RI56 91 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 SEC31AO94979 1220 aaKnown RBP13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 S1PR4O95977 384 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 RECKO95980 971 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 ITGB2P05107 769 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 ENO3P13929 434 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 PLA2G2AP14555 144 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 CD9P21926 228 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 PEBP1P30086 187 aaKnown RBP13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 FMO4P31512 558 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 DLSTP36957 453 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 ARL4CP56559 192 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 RPS18P62269 152 aaKnown RBP13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 DHX9Q08211 1270 aaKnown RBP13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 CDC20Q12834 499 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 CRYMQ14894 314 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 ZIC1Q15915 447 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 DEFB110Q30KQ9 67 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 COLEC12Q5KU26 742 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 LRRC8EQ6NSJ5 796 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 UGT3A1Q6NUS8 523 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 SPESP1Q6UW49 350 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 UNC5AQ6ZN44 842 aa13.35□□□□□ -0.27
SOX2-OT-208ENST00000477928 AGGF1Q8N302 714 aaeCLIP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms