RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 ZNF658BQ4V348 819 aaPredicted RBP7.74□□□□□ -1.17
VMA21-203ENST00000477649 LRRC73Q5JTD7 316 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 EGFLAMQ63HQ2 1017 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 C8orf82Q6P1X6 216 aaPredicted RBP7.74□□□□□ -1.17
VMA21-203ENST00000477649 PNCKQ6P2M8 343 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 PARM1Q6UWI2 310 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 GK5Q6ZS86 529 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 Q6ZSR9 355 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 MSANTD1Q6ZTZ1 278 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 USP30Q70CQ3 517 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 DET1Q7L5Y6 550 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 ZFAND4Q86XD8 727 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 OXR1Q8N573 874 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 AADATQ8N5Z0 425 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 DPP10Q8N608 796 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 BEND7Q8N7W2 519 aaPredicted RBP7.74□□□□□ -1.17
VMA21-203ENST00000477649 ZNF366Q8N895 744 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 SNX31Q8N9S9 440 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 SMRP1Q8NCR6 262 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 OR2L2Q8NH16 312 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 OR56A3Q8NH54 315 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 FBXO27Q8NI29 283 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 WDR60Q8WVS4 1066 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 MYLIPQ8WY64 445 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 FGF14Q92915 247 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 UBE2E3Q969T4 207 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 ASB9Q96DX5 294 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 SPDL1Q96EA4 605 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 CCDC97Q96F63 343 aaPredicted RBP7.74□□□□□ -1.17
VMA21-203ENST00000477649 MSLNLQ96KJ4 702 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 KCNA7Q96RP8 456 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 ACOX2Q99424 681 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 PLA2G2FQ9BZM2 168 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 EHD1Q9H4M9 534 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 ELOVL6Q9H5J4 265 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 ZNF576Q9H609 170 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 LRTM1Q9HBL6 345 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 PREBQ9HCU5 417 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 S100A14Q9HCY8 104 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 PHPT1Q9NRX4 125 aaPredicted RBP7.74□□□□□ -1.17
VMA21-203ENST00000477649 NMRK1Q9NWW6 199 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 C1orf109Q9NX04 203 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 C6orf203Q9P0P8 240 aaPredicted RBP7.74□□□□□ -1.17
VMA21-203ENST00000477649 FZD4Q9ULV1 537 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 G3BP2Q9UN86 482 aaKnown RBP7.74□□□□□ -1.17
VMA21-203ENST00000477649 BTRCQ9Y297 605 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 PCDHGA11Q9Y5H2 935 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 KCNE2Q9Y6J6 123 aa7.74□□□□□ -1.17
VMA21-203ENST00000477649 KIAA1549LQ6ZVL6 1849 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 TRIOBPQ9H2D6 2365 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 KANSL1LA0AUZ9 987 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 CCDC154A6NI56 674 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 OR2AG2A6NM03 316 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 ARHGEF33A8MVX0 844 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 LOC730098B7Z3J9 87 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 H0YIV9 168 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 NR5A2O00482 541 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 FBP2O00757 339 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 TOR1BO14657 336 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 KMOO15229 486 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 PI15O43692 258 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 KDM1AO60341 852 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 LILRB5O75023 590 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 DNTTP04053 509 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 IL6P05231 212 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 HOXC4P09017 264 aaPredicted RBP7.73□□□□□ -1.17
VMA21-203ENST00000477649 HSD17B1P14061 328 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 PRDX3P30048 256 aaKnown RBP7.73□□□□□ -1.17
VMA21-203ENST00000477649 CTHP32929 405 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 DRD3P35462 400 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 TRIM23P36406 574 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 POLR2JP52435 117 aaKnown RBP7.73□□□□□ -1.17
VMA21-203ENST00000477649 CTSCP53634 463 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 CTBSQ01459 385 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 DMPKQ09013 629 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 LRRC74AQ0VAA2 488 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 MESP2Q0VG99 397 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 GRSF1Q12849 480 aaKnown RBP eCLIP7.73□□□□□ -1.17
VMA21-203ENST00000477649 SGCGQ13326 291 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 FLOT2Q14254 428 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 TRIM25Q14258 630 aaKnown RBP7.73□□□□□ -1.17
VMA21-203ENST00000477649 DPY19L1Q2PZI1 675 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 POM121L1PQ3SYA9 428 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 AASDHQ4L235 1098 aaPredicted RBP7.73□□□□□ -1.17
VMA21-203ENST00000477649 PAGE2BQ5JRK9 111 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 AGBL4Q5VU57 503 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 FRG2Q64ET8 278 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 GRHL2Q6ISB3 625 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 CAPN13Q6MZZ7 669 aaPredicted RBP7.73□□□□□ -1.17
VMA21-203ENST00000477649 PAOXQ6QHF9 649 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 LRRTM4Q86VH4 590 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 AMZ2Q86W34 360 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 TRAPPC5Q8IUR0 188 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 FUNDC1Q8IVP5 155 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 SFRP1Q8N474 314 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 HDDC3Q8N4P3 179 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 RAB42Q8N4Z0 105 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 CATSPER1Q8NEC5 780 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 DENND6BQ8NEG7 585 aa7.73□□□□□ -1.17
VMA21-203ENST00000477649 OR9A1PQ8NGU1 263 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms