RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 FAM26DQ5JW98 314 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 VN1R5Q7Z5H4 357 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 TMEM179BQ7Z7N9 219 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 SYVN1Q86TM6 617 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 RYBPQ8N488 228 aaPredicted RBP14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 TOP6BLQ8N6T0 577 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 GALNT6Q8NCL4 622 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 DNAJB8Q8NHS0 232 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 CLIP3Q96DZ5 547 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 RIPOR3Q96MK2 946 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 ZBTB18Q99592 522 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 PITX2Q99697 317 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 RNF39Q9H2S5 420 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 CATSPERBQ9H7T0 1116 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 RBM22Q9NW64 420 aaKnown RBP eCLIP14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 STMN3Q9NZ72 180 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 EHD3Q9NZN3 535 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 SMIM28A0A1B0GU29 152 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 KLK8O60259 260 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 CKBP12277 381 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 ITGA2P17301 1181 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 FSHRP23945 695 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 MAGEA2P43356 314 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 ELP6Q0PNE2 266 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 LAPTM5Q13571 262 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 WDR45BQ5MNZ6 344 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 MRNIPQ6NTE8 343 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 ZNF517Q6ZMY9 492 aaPredicted RBP14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 GPRIN3Q6ZVF9 776 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 FLCNQ8NFG4 579 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 OR6P1Q8NGX9 317 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 OR2T11Q8NH01 316 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 ST6GAL2Q96JF0 529 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 RIBC2Q9H4K1 309 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 NDRG4Q9ULP0 352 aaKnown RBP14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 BTBD3Q9Y2F9 522 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 PKP3Q9Y446 797 aa14.94□□□□□ -0.02
CLSTN1-205ENST00000477264 HMX3A6NHT5 357 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 SLC4A1P02730 911 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 SOX6P35712 828 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 KRT20P35900 424 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 NUDT1P36639 197 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 SLC15A1P46059 708 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 CLK3P49761 638 aaKnown RBP14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 GALK2Q01415 458 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 FPGSQ05932 587 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 GPR50Q13585 617 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 PON2Q15165 354 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 KDM4DQ6B0I6 523 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 SYCE2Q6PIF2 218 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 RAB43Q86YS6 212 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 JPH3Q8WXH2 748 aaPredicted RBP14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 ZNF419Q96HQ0 510 aaPredicted RBP14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 ZNF382Q96SR6 550 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 CDADC1Q9BWV3 514 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 REXO4Q9GZR2 422 aaKnown RBP14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 CXCL16Q9H2A7 254 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 OSER1Q9NX31 292 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 ADPRHL2Q9NX46 363 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 FNIP2Q9P278 1114 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 PCTPQ9UKL6 214 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 NEU3Q9UQ49 428 aa14.93□□□□□ -0.02
CLSTN1-205ENST00000477264 LOC105371267A0A1B0GV96 52 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 YJEFN3A6XGL0 299 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 MUSKO15146 869 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 ICMTO60725 284 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 SEC22BO75396 215 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 UGT2B17O75795 530 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 DBTP11182 482 aaKnown RBP14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 KCNE1P15382 129 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 AKT1P31749 480 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 TIE1P35590 1138 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 UGT2B15P54855 530 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 ACVR1Q04771 509 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 RBBP7Q16576 425 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 CPZQ66K79 652 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 ATG9BQ674R7 924 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 ANKRD34AQ69YU3 496 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 CYP20A1Q6UW02 462 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 RFPL4BQ6ZWI9 263 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 SLC46A3Q7Z3Q1 461 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 CCDC190Q86UF4 302 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 SLC13A3Q8WWT9 602 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 FATE1Q969F0 183 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 PYCR2Q96C36 320 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 AARSD1Q9BTE6 412 aaKnown RBP14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 MED10Q9BTT4 135 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 GON7Q9BXV9 100 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 TAS2R9Q9NYW1 312 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 PCDHGB2Q9Y5G2 931 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 LCHNA4D1U4 455 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 DSCR3O14972 297 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 LCKP06239 509 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 PRKACGP22612 351 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 RAD51Q06609 339 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 GALNT3Q14435 633 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 GBX1Q14549 363 aa14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 NFE2Q16621 373 aaPredicted RBP14.92□□□□□ -0.02
CLSTN1-205ENST00000477264 SMU1Q2TAY7 513 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms