RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 NPEPL1Q8NDH3 523 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 GRHL3Q8TE85 626 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 TMEM143Q96AN5 459 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 ZNF524Q96C55 264 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 PGLYRP2Q96PD5 576 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 NUP85Q9BW27 656 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 TXLNGQ9NUQ3 528 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 ADPRHL2Q9NX46 363 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 ZNF624Q9P2J8 865 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-211ENST00000476215 CPSF3Q9UKF6 684 aaKnown RBP4.54□□□□□ -1.68
PTCD3-211ENST00000476215 RNF150Q9ULK6 438 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 TCF19Q9Y242 345 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 CCL27Q9Y4X3 112 aa4.54□□□□□ -1.68
PTCD3-211ENST00000476215 SMARCA2P51531 1590 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 A0A0G2JLW4 131 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 PIGNO95427 931 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 C22orf31O95567 290 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 IGKV3-20P01619 116 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 FYNP06241 537 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 CCDC175P0C221 793 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 OR52Z1P0C646 297 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 HSPA8P11142 646 aaKnown RBP4.53□□□□□ -1.68
PTCD3-211ENST00000476215 ERCC2P18074 760 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 ACHEP22303 614 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 JAK1P23458 1154 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 MNDAP41218 407 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 RAD23AP54725 363 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 COG2Q14746 738 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 TNIP1Q15025 636 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 SYT14P1Q58G82 188 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 GSG1LQ6UXU4 331 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 TMEM139Q8IV31 216 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 ZNF383Q8NA42 475 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 CNBD1Q8NA66 436 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 OLIG1Q8TAK6 271 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 GRAPLQ8TC17 118 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-211ENST00000476215 NR4A3Q92570 626 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 DHX58Q96C10 678 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 HES6Q96HZ4 224 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 GKN1Q9NS71 199 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 ZNF701Q9NV72 531 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-211ENST00000476215 CACNG4Q9UBN1 327 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 LRWD1Q9UFC0 647 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 ZDHHC2Q9UIJ5 367 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 DAPK2Q9UIK4 370 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 RPS6KL1Q9Y6S9 549 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 SMARCA4P51532 1647 aa4.53□□□□□ -1.68
PTCD3-211ENST00000476215 ERCC6Q03468 1493 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 IGLV9-49A0A0B4J1Y8 123 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 A0A1W2PPQ1 181 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 NEMP2A6NFY4 417 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 ERVV-2B6SEH9 535 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 SLC22A2O15244 555 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 PRKRAO75569 313 aaKnown RBP4.52□□□□□ -1.69
PTCD3-211ENST00000476215 IGHV2-70P01814 119 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 SP1P08047 785 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 CYP11B2P19099 503 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 EEF1B2P24534 225 aaKnown RBP4.52□□□□□ -1.69
PTCD3-211ENST00000476215 PRKCZQ05513 592 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 RBPJQ06330 500 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 ACSM1Q08AH1 577 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 TAF13Q15543 124 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 PRR27Q6MZM9 219 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 C11orf63Q6NUN7 778 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 NUP54Q7Z3B4 507 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 MFN1Q8IWA4 741 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 CDK20Q8IZL9 346 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 ZNF843Q8N446 348 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 MOB3AQ96BX8 217 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 THOC1Q96FV9 657 aaKnown RBP4.52□□□□□ -1.69
PTCD3-211ENST00000476215 SENP5Q96HI0 755 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-211ENST00000476215 ZNF558Q96NG5 402 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 NAA11Q9BSU3 229 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-211ENST00000476215 LAT2Q9GZY6 243 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 ERVMER34-1Q9H9K5 563 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 SLC52A3Q9NQ40 469 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 GIMAP2Q9UG22 337 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 RIPK3Q9Y572 518 aa4.52□□□□□ -1.69
PTCD3-211ENST00000476215 BAZ1AQ9NRL2 1556 aaPredicted RBP4.52□□□□□ -1.69
PTCD3-211ENST00000476215 BAZ1BQ9UIG0 1483 aaKnown RBP4.51□□□□□ -1.69
PTCD3-211ENST00000476215 NESP48681 1621 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 LOC101059948A0A1B0GTJ6 334 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 A0A1W2PN81 502 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 TSPY2A6NKD2 308 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 BLOC1S5-TXNDC5H3BN57 136 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 H7C0S8 307 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 PTGESO14684 152 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 GRID2O43424 1007 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 PCDH7O60245 1069 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 ACSL3O95573 720 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 ATP5BP06576 529 aaKnown RBP4.51□□□□□ -1.69
PTCD3-211ENST00000476215 TSPY3P0CV98 308 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 TSPY8P0CW00 308 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 CA4P22748 312 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 AZGP1P25311 298 aaKnown RBP4.51□□□□□ -1.69
PTCD3-211ENST00000476215 CEACAM8P31997 349 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-211ENST00000476215 CHRNA7P36544 502 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 CDKN1AP38936 164 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 MAT1AQ00266 395 aaKnown RBP4.51□□□□□ -1.69
PTCD3-211ENST00000476215 TSPY1Q01534 308 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms