RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CD27P26842 260 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 GGT5P36269 586 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 ABCG1P45844 678 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 THOP1P52888 689 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 GYS2P54840 703 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 ABCE1P61221 599 aaKnown RBP6.86□□□□□ -1.31
SHQ1-207ENST00000475558 HERVK_113P63132 956 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 TIAL1Q01085 375 aaKnown RBP eCLIP6.86□□□□□ -1.31
SHQ1-207ENST00000475558 SEMG2Q02383 582 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 ZNF33BQ06732 778 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 HSPA14Q0VDF9 509 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 GBX1Q14549 363 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 PCBP2Q15366 365 aaKnown RBP eCLIP6.86□□□□□ -1.31
SHQ1-207ENST00000475558 TGFBIQ15582 683 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 CHI3L2Q15782 390 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 SMAD1Q15797 465 aaKnown RBP6.86□□□□□ -1.31
SHQ1-207ENST00000475558 SYTL3Q4VX76 610 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 TECRLQ5HYJ1 363 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 LRRC73Q5JTD7 316 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 C10orf62Q5T681 223 aaPredicted RBP6.86□□□□□ -1.31
SHQ1-207ENST00000475558 METTL21CQ5VZV1 264 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 METRNLQ641Q3 311 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 C16orf46Q6P387 395 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 UNC5DQ6UXZ4 953 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 WASH2PQ6VEQ5 465 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 RFLNAQ6ZTI6 216 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 PIGWQ7Z7B1 504 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 HEATR4Q86WZ0 1026 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 GALNT13Q8IUC8 556 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 TRAPPC5Q8IUR0 188 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 C10orf107Q8IVU9 208 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 PARP9Q8IXQ6 854 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 CFAP206Q8IYR0 622 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 SLC22A15Q8IZD6 547 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 FBXO39Q8N4B4 442 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 GBP7Q8N8V2 638 aaPredicted RBP6.86□□□□□ -1.31
SHQ1-207ENST00000475558 MFSD2AQ8NA29 543 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 SIDT2Q8NBJ9 832 aaKnown RBP6.86□□□□□ -1.31
SHQ1-207ENST00000475558 OR6Y1Q8NGX8 325 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 PIWIL2Q8TC59 973 aaKnown RBP6.86□□□□□ -1.31
SHQ1-207ENST00000475558 HPS1Q92902 700 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 RAD51AP1Q96B01 352 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 ERLEC1Q96DZ1 483 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 BOCQ9BWV1 1114 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 ERVK-6Q9BXR3 956 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 PCBD2Q9H0N5 130 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 OR2AG1Q9H205 316 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 CD93Q9NPY3 652 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 WASH6PQ9NQA3 447 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 TRNAU1APQ9NX07 287 aaKnown RBP6.86□□□□□ -1.31
SHQ1-207ENST00000475558 CD274Q9NZQ7 290 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 CPSF2Q9P2I0 782 aaKnown RBP6.86□□□□□ -1.31
SHQ1-207ENST00000475558 SLC17A6Q9P2U8 582 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 ATXN10Q9UBB4 475 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 XPR1Q9UBH6 696 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 ZNHIT2Q9UHR6 403 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 EIF2B4Q9UI10 523 aaKnown RBP6.86□□□□□ -1.31
SHQ1-207ENST00000475558 TMPRSS11EQ9UL52 423 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 ZFR2Q9UPR6 939 aaKnown RBP6.86□□□□□ -1.31
SHQ1-207ENST00000475558 MED16Q9Y2X0 877 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 RAP2CQ9Y3L5 183 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 COLEC10Q9Y6Z7 277 aa6.86□□□□□ -1.31
SHQ1-207ENST00000475558 A0A0U1RQS6 177 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 TRPC5OSA6NMA1 111 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 EBAG9O00559 213 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 HGSO14964 777 aaPredicted RBP6.85□□□□□ -1.31
SHQ1-207ENST00000475558 ATXN7O15265 892 aaPredicted RBP6.85□□□□□ -1.31
SHQ1-207ENST00000475558 INPP4BO15327 924 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 SLC31A1O15431 190 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 FFAR2O15552 330 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 DLX3O60479 287 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 SNNO75324 88 aaPredicted RBP6.85□□□□□ -1.31
SHQ1-207ENST00000475558 HSPA4LO95757 839 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 TSPAN12O95859 305 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 CHEK2O96017 543 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 SOD1P00441 154 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 PCCBP05166 539 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 ZNF8P17098 575 aaPredicted RBP6.85□□□□□ -1.31
SHQ1-207ENST00000475558 CCND1P24385 295 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 CCR7P32248 378 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 ACSL1P33121 698 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 HALP42357 657 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 GRK6P43250 576 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 GLRBP48167 497 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 RPL14P50914 215 aaKnown RBP6.85□□□□□ -1.31
SHQ1-207ENST00000475558 AFF3P51826 1226 aaKnown RBP6.85□□□□□ -1.31
SHQ1-207ENST00000475558 NAGLUP54802 743 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 PKNOX1P55347 436 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 PFN3P60673 137 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 RACK1P63244 317 aaKnown RBP6.85□□□□□ -1.31
SHQ1-207ENST00000475558 B4GALNT1Q00973 533 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 CTBSQ01459 385 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 BNC1Q01954 994 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 BST1Q10588 318 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 RCN2Q14257 317 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 NFATC4Q14934 902 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 ARHGAP19Q14CB8 494 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 PCLAFQ15004 111 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 SETDB1Q15047 1291 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 TEAD4Q15561 434 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms