RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CBX1P83916 185 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 MPP1Q00013 466 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 RHDQ02161 417 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 USP10Q14694 798 aaKnown RBP15.25■□□□□ 0.03
CPSF3-203ENST00000475482 TGIF1Q15583 401 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 PLA2G4EQ3MJ16 856 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 ARHGAP40Q5TG30 622 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 SNX20Q7Z614 316 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 BANPQ8N9N5 519 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 ZNF398Q8TD17 642 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 ULK4Q96C45 1275 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 WBP1Q96G27 269 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 AHCYL2Q96HN2 611 aaKnown RBP15.25■□□□□ 0.03
CPSF3-203ENST00000475482 CCNL2Q96S94 520 aaPredicted RBP15.25■□□□□ 0.03
CPSF3-203ENST00000475482 DDA1Q9BW61 102 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 TBC1D10AQ9BXI6 508 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 CAPS2Q9BXY5 557 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 ZCCHC2Q9C0B9 1178 aaKnown RBP15.25■□□□□ 0.03
CPSF3-203ENST00000475482 OSGEPL1Q9H4B0 414 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 FBXO6Q9NRD1 293 aaPredicted RBP15.25■□□□□ 0.03
CPSF3-203ENST00000475482 POT1Q9NUX5 634 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 DCDC2Q9UHG0 476 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 SLC39A10Q9ULF5 831 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 DNAJC16Q9Y2G8 782 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 BAHCC1Q9P281 2608 aa15.25■□□□□ 0.03
CPSF3-203ENST00000475482 CFAP46Q8IYW2 2715 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 FAM95CA0A1B0GW59 222 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 HMX2A2RU54 273 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 OR51F1A6NGY5 319 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 ERVH48-1M5A8F1 160 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 GLRA3O75311 464 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 HAUS5O94927 633 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 PRAMEF1O95521 474 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 C9P02748 559 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 GSTA1P08263 222 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 ANKRD34CP0C6C1 535 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 IDSP22304 550 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 CSTF2P33240 577 aaKnown RBP eCLIP15.24■□□□□ 0.03
CPSF3-203ENST00000475482 MDH1P40925 334 aaKnown RBP15.24■□□□□ 0.03
CPSF3-203ENST00000475482 GTF2H3Q13889 308 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 CLCA4Q14CN2 919 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 TMEM164Q5U3C3 297 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 FAM45BPQ6NSW5 357 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 XKR5Q6UX68 686 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 RAPH1Q70E73 1250 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 TAS2R42Q7RTR8 314 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 AMZ2Q86W34 360 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 ZFAND4Q86XD8 727 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 TRAPPC5Q8IUR0 188 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 RBM12BQ8IXT5 1001 aaKnown RBP15.24■□□□□ 0.03
CPSF3-203ENST00000475482 GDAP1Q8TB36 358 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 FAM45AQ8TCE6 357 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 DYDC1Q8WWB3 177 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 TTC9Q92623 222 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 PMEPA1Q969W9 287 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 ELMO2Q96JJ3 720 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 ZNF514Q96K75 400 aaPredicted RBP15.24■□□□□ 0.03
CPSF3-203ENST00000475482 SPRY4Q9C004 299 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 ASB8Q9H765 288 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 SLC40A1Q9NP59 571 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 SNX15Q9NRS6 342 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 OCIAD1Q9NX40 245 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 GRID1Q9ULK0 1009 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 WDR37Q9Y2I8 494 aa15.24■□□□□ 0.03
CPSF3-203ENST00000475482 MTO1Q9Y2Z2 717 aaKnown RBP15.24■□□□□ 0.03
CPSF3-203ENST00000475482 A0A087X1B8 175 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 F8W8V4 182 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 GOLGA8RI6L899 631 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 AGRPO00253 132 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 SGTAO43765 313 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 TYROBPO43914 113 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 SPAG7O75391 227 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 POP7O75817 140 aaKnown RBP15.23■□□□□ 0.03
CPSF3-203ENST00000475482 VIPP01282 170 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 ALDOAP04075 364 aaKnown RBP15.23■□□□□ 0.03
CPSF3-203ENST00000475482 COL6A2P12110 1019 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 CHN1P15882 459 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 VCLP18206 1134 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 RPL10P27635 214 aaKnown RBP15.23■□□□□ 0.03
CPSF3-203ENST00000475482 GABRB3P28472 473 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 CRHR1P34998 444 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 MAGEA12P43365 314 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 KPNA2P52292 529 aaKnown RBP15.23■□□□□ 0.03
CPSF3-203ENST00000475482 ADARP55265 1226 aaKnown RBP15.23■□□□□ 0.03
CPSF3-203ENST00000475482 RAB10P61026 200 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 MC2RQ01718 297 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 HHATQ5VTY9 493 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 TMEM220Q6QAJ8 160 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 CCDC81Q6ZN84 652 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 GPATCH11Q8N954 259 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 ANKRD42Q8N9B4 389 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 SLC39A7Q92504 469 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 NCSTNQ92542 709 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 LINC00615Q96LM1 132 aaPredicted RBP15.23■□□□□ 0.03
CPSF3-203ENST00000475482 PCMTD2Q9NV79 361 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 MARCH4Q9P2E8 410 aaPredicted RBP15.23■□□□□ 0.03
CPSF3-203ENST00000475482 CRLS1Q9UJA2 301 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 VWA7Q9Y334 891 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 B3GALT1Q9Y5Z6 326 aa15.23■□□□□ 0.03
CPSF3-203ENST00000475482 PIEZO2Q9H5I5 2752 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms