RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 GBA3Q9H227 469 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 SOX17Q9H6I2 414 aaPredicted RBP9.24□□□□□ -0.93
MCF2L-223ENST00000473345 ATP13A2Q9NQ11 1180 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 PLA2G3Q9NZ20 509 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 RSPH14Q9UHP6 348 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 CRLS1Q9UJA2 301 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 PADI2Q9Y2J8 665 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 DOCK10Q96BY6 2186 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 F8P00451 2351 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 CELSR1Q9NYQ6 3014 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 A0A0J9YY10 115 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 C17orf113A0A1B0GUU1 675 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 MATN2O00339 956 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 PEX12O00623 359 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 PCDH17O14917 1159 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 ONECUT2O95948 504 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 F10P00742 488 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 ALPPP05187 535 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 ZFXP17010 805 aaPredicted RBP9.23□□□□□ -0.93
MCF2L-223ENST00000473345 MAGP20916 626 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 ACRV1P26436 265 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 MC4RP32245 332 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 GRIA3P42263 894 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 OR1D4P47884 311 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 CD151P48509 253 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 NR2C2P49116 596 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 RIPPLY3P57055 190 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 OTUD4Q01804 1114 aaKnown RBP9.23□□□□□ -0.93
MCF2L-223ENST00000473345 CDC16Q13042 620 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 AIMP2Q13155 320 aaKnown RBP9.23□□□□□ -0.93
MCF2L-223ENST00000473345 ELOAQ14241 798 aaKnown RBP9.23□□□□□ -0.93
MCF2L-223ENST00000473345 CYP2A13Q16696 494 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 FCRL6Q6DN72 434 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 LINC00696Q6ZRV3 163 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 NCCRP1Q6ZVX7 275 aaPredicted RBP9.23□□□□□ -0.93
MCF2L-223ENST00000473345 KLHDC8BQ8IXV7 354 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 PROKR1Q8TCW9 393 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 LKAAEAR1Q8TD35 194 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 RELTQ969Z4 430 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 C8orf44Q96CB5 159 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 CCDC120Q96HB5 630 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 LURAP1Q96LR2 239 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 IP6K3Q96PC2 410 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 IL17FQ96PD4 163 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 COPS8Q99627 209 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 TRIM56Q9BRZ2 755 aaKnown RBP9.23□□□□□ -0.93
MCF2L-223ENST00000473345 HEMGNQ9BXL5 484 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 CHRNA10Q9GZZ6 450 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 MVB12BQ9H7P6 319 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 PIH1D1Q9NWS0 290 aaKnown RBP9.23□□□□□ -0.93
MCF2L-223ENST00000473345 ZDHHC3Q9NYG2 299 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 EURLQ9NYK6 297 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.23□□□□□ -0.93
MCF2L-223ENST00000473345 NDOR1Q9UHB4 597 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 G3BP2Q9UN86 482 aaKnown RBP9.23□□□□□ -0.93
MCF2L-223ENST00000473345 LUC7L2Q9Y383 392 aaKnown RBP9.23□□□□□ -0.93
MCF2L-223ENST00000473345 HEBP2Q9Y5Z4 205 aa9.23□□□□□ -0.93
MCF2L-223ENST00000473345 HIVEP1P15822 2718 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 DIDO1Q9BTC0 2240 aaKnown RBP9.22□□□□□ -0.93
MCF2L-223ENST00000473345 SLC5A10A0PJK1 596 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 VSTM2BA6NLU5 285 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 FFAR3O14843 346 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 GPR42O15529 346 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 ZNHIT1O43257 154 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 CTSVO60911 334 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 JRKO75564 520 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 HBQ1P09105 142 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 TPH1P17752 444 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 ALAS2P22557 587 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 ARHGAP25P42331 645 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 TBX2Q13207 712 aaPredicted RBP9.22□□□□□ -0.93
MCF2L-223ENST00000473345 TESK1Q15569 626 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 AADACL2Q6P093 401 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 TTLL10Q6ZVT0 673 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 OVCH1Q7RTY7 1134 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 SNX20Q7Z614 316 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 LAPTM4BQ86VI4 370 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 TAX1BP1Q86VP1 789 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 CCDC50Q8IVM0 306 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 MCATQ8IVS2 390 aaKnown RBP9.22□□□□□ -0.93
MCF2L-223ENST00000473345 VSTM4Q8IW00 320 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 GPR135Q8IZ08 494 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 CCDC110Q8TBZ0 833 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 IQCDQ96DY2 449 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 THOC3Q96J01 351 aaKnown RBP9.22□□□□□ -0.93
MCF2L-223ENST00000473345 ZNF285Q96NJ3 590 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 DNAJC7Q99615 494 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 FSD1LQ9BXM9 530 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 AP1M1Q9BXS5 423 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 AGPAT4Q9NRZ5 378 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 IMPACTQ9P2X3 320 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 COPG2Q9UBF2 871 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 GPN3Q9UHW5 284 aaPredicted RBP9.22□□□□□ -0.93
MCF2L-223ENST00000473345 LCMT1Q9UIC8 334 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 CDC23Q9UJX2 597 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 AP1M2Q9Y6Q5 423 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 MAU2Q9Y6X3 613 aa9.22□□□□□ -0.93
MCF2L-223ENST00000473345 C5orf60A6NFR6 353 aa9.21□□□□□ -0.94
MCF2L-223ENST00000473345 PRICKLE3O43900 615 aaPredicted RBP9.21□□□□□ -0.94
MCF2L-223ENST00000473345 OR1I1O60431 355 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms