RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 RIMKLBQ9ULI2 386 aa19.06■□□□□ 0.64
COL9A3-210ENST00000472880 ZNF148Q9UQR1 794 aa19.06■□□□□ 0.64
COL9A3-210ENST00000472880 BLACEA4D250 179 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 H3BMH7 237 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 SUN1O94901 812 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 CD63P08962 238 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 TPBGLP0DKB5 382 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 CBSLP0DN79 551 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 ADRA1DP25100 572 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 CBSP35520 551 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 PPARGP37231 505 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-210ENST00000472880 FOLR3P41439 243 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 GABRA4P48169 554 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 OASLQ15646 514 aaKnown RBP19.05■□□□□ 0.64
COL9A3-210ENST00000472880 KYNUQ16719 465 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 SLC5A12Q1EHB4 618 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 FASTKD1Q53R41 847 aaKnown RBP19.05■□□□□ 0.64
COL9A3-210ENST00000472880 DNAJC21Q5F1R6 531 aaKnown RBP19.05■□□□□ 0.64
COL9A3-210ENST00000472880 JMJD6Q6NYC1 403 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-210ENST00000472880 TLDC1Q6P9B6 456 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 SLC22A15Q8IZD6 547 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 ZNF655Q8N720 491 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-210ENST00000472880 OR4L1Q8NH43 312 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 SPRTNQ9H040 489 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-210ENST00000472880 SLAMF7Q9NQ25 335 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 LUZP4Q9P127 313 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 IFT80Q9P2H3 777 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-210ENST00000472880 PTRH2Q9Y3E5 179 aaKnown RBP19.05■□□□□ 0.64
COL9A3-210ENST00000472880 MAP4K5Q9Y4K4 846 aa19.05■□□□□ 0.64
COL9A3-210ENST00000472880 HCRTR1O43613 425 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 KLF7O75840 302 aaPredicted RBP19.04■□□□□ 0.64
COL9A3-210ENST00000472880 AGFG2O95081 481 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 RPN2P04844 631 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 PEBP1P30086 187 aaKnown RBP19.04■□□□□ 0.64
COL9A3-210ENST00000472880 PKLRP30613 574 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 GRIA1P42261 906 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 RAB28P51157 221 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 DCDP81605 110 aaKnown RBP19.04■□□□□ 0.64
COL9A3-210ENST00000472880 ACVR1Q04771 509 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 HSPA14Q0VDF9 509 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 RAPSNQ13702 412 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 SSPNQ14714 243 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 AARS2Q5JTZ9 985 aaKnown RBP19.04■□□□□ 0.64
COL9A3-210ENST00000472880 FHL5Q5TD97 284 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 NLRP9Q7RTR0 991 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 CCDC89Q8N998 374 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 SPC24Q8NBT2 197 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 PPHLN1Q8NEY8 458 aaKnown RBP19.04■□□□□ 0.64
COL9A3-210ENST00000472880 FER1L6-AS2Q96M78 137 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 GBP5Q96PP8 586 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 NDC1Q9BTX1 674 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 AP1M1Q9BXS5 423 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 MFRPQ9BY79 579 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 LRRC4CQ9HCJ2 640 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 RAB6BQ9NRW1 208 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 DHCR7Q9UBM7 475 aaKnown RBP19.04■□□□□ 0.64
COL9A3-210ENST00000472880 MED13Q9UHV7 2174 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 ANAPC5Q9UJX4 755 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 PLCL2Q9UPR0 1127 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 TCAF1Q9Y4C2 921 aa19.04■□□□□ 0.64
COL9A3-210ENST00000472880 NAV2Q8IVL1 2488 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 PCSK5Q92824 1860 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 PEX12O00623 359 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 IGHEP01854 428 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 CCR7P32248 378 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 SLC9A5Q14940 896 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 TMED2Q15363 201 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 VWA5B1Q5TIE3 1220 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 SLC6A19Q695T7 634 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 ZNF534Q76KX8 674 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 DCUN1D3Q8IWE4 304 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 RNF10Q8N5U6 811 aaKnown RBP19.03■□□□□ 0.64
COL9A3-210ENST00000472880 CLEC1AQ8NC01 280 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 ASZ1Q8WWH4 475 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 PEX13Q92968 403 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 PNPLA2Q96AD5 504 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 ZNF778Q96MU6 729 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 PSMG3-AS1Q96PY0 264 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 SMAD5Q99717 465 aaKnown RBP19.03■□□□□ 0.64
COL9A3-210ENST00000472880 CASS4Q9NQ75 786 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 MAP10Q9P2G4 905 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 CDYLQ9Y232 598 aa19.03■□□□□ 0.64
COL9A3-210ENST00000472880 APOA4P06727 396 aa19.02■□□□□ 0.64
COL9A3-210ENST00000472880 APRTP07741 180 aa19.02■□□□□ 0.64
COL9A3-210ENST00000472880 CTSBP07858 339 aa19.02■□□□□ 0.64
COL9A3-210ENST00000472880 MAGP20916 626 aa19.02■□□□□ 0.64
COL9A3-210ENST00000472880 SNX1Q13596 522 aa19.02■□□□□ 0.64
COL9A3-210ENST00000472880 SEMA3AQ14563 771 aa19.02■□□□□ 0.64
COL9A3-210ENST00000472880 INPP5JQ15735 1006 aaPredicted RBP19.02■□□□□ 0.64
COL9A3-210ENST00000472880 NKAIN1Q4KMZ8 207 aa19.02■□□□□ 0.64
COL9A3-210ENST00000472880 PRR30Q53SZ7 412 aaPredicted RBP19.02■□□□□ 0.64
COL9A3-210ENST00000472880 UNC5DQ6UXZ4 953 aa19.02■□□□□ 0.64
COL9A3-210ENST00000472880 SLC13A5Q86YT5 568 aaPredicted RBP19.02■□□□□ 0.64
COL9A3-210ENST00000472880 VRK3Q8IV63 474 aa19.02■□□□□ 0.64
COL9A3-210ENST00000472880 DNAJC22Q8N4W6 341 aa19.02■□□□□ 0.64
COL9A3-210ENST00000472880 OR2Y1Q8NGV0 311 aa19.02■□□□□ 0.64
COL9A3-210ENST00000472880 CFAP61Q8NHU2 1237 aa19.02■□□□□ 0.64
COL9A3-210ENST00000472880 LKAAEAR1Q8TD35 194 aa19.02■□□□□ 0.64
COL9A3-210ENST00000472880 C1orf54Q8WWF1 131 aa19.02■□□□□ 0.64
COL9A3-210ENST00000472880 DLG3Q92796 817 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms