RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 YIPF3Q9GZM5 350 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 DHX33Q9H6R0 707 aaKnown RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 WDR6Q9NNW5 1121 aaKnown RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 ADAM18Q9Y3Q7 739 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 SALL3Q9BXA9 1300 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 TTC24A2A3L6 582 aaPredicted RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 LIASO43766 372 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 UGT1A9O60656 530 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 PPP1R37O75864 691 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 UGT1A6P19224 532 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 UGT1A4P22310 534 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 UGT1A3P35503 534 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 TMED10P49755 219 aaKnown RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 RPL7AP62424 266 aaKnown RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 STK11Q15831 433 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 NUDT13Q86X67 352 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 TFGQ92734 400 aaPredicted RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 RAB7BQ96AH8 199 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 HSPA12BQ96MM6 686 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 NAA11Q9BSU3 229 aaPredicted RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 FBRSQ9HAH7 460 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 UGT1A7Q9HAW7 530 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 UGT1A10Q9HAW8 530 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 UGT1A8Q9HAW9 530 aa8.41□□□□□ -1.06
CD47-204ENST00000471694 PTRH2Q9Y3E5 179 aaKnown RBP8.41□□□□□ -1.06
CD47-204ENST00000471694 IGLON5A6NGN9 336 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 TGFB1P01137 390 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 SNRPB2P08579 225 aaKnown RBP8.4□□□□□ -1.06
CD47-204ENST00000471694 OGNP20774 298 aaKnown RBP8.4□□□□□ -1.06
CD47-204ENST00000471694 ZNF84P51523 738 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 NTRK3Q16288 839 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 ULK3Q6PHR2 472 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 OR2T3Q8NH03 318 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 PIH1D2Q8WWB5 315 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 TMEM121BQ9BXQ6 578 aaPredicted RBP8.4□□□□□ -1.06
CD47-204ENST00000471694 ERVK-18Q9QC07 812 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 MAFFQ9ULX9 164 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 GMPPBQ9Y5P6 360 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 DCXO43602 365 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 UROSP10746 265 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 CALB2P22676 271 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 DNAJA1P31689 397 aaKnown RBP8.4□□□□□ -1.06
CD47-204ENST00000471694 USP46P62068 366 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 GPR17Q13304 367 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 PRKD1Q15139 912 aaPredicted RBP8.4□□□□□ -1.06
CD47-204ENST00000471694 CHRNA6Q15825 494 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 SLC10A6Q3KNW5 377 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 UBAP2Q5T6F2 1119 aaKnown RBP8.4□□□□□ -1.06
CD47-204ENST00000471694 GJD3Q8N144 294 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 PYROXD2Q8N2H3 581 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 PNLDC1Q8NA58 520 aaKnown RBP8.4□□□□□ -1.06
CD47-204ENST00000471694 TMCO6Q96DC7 493 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 SH3YL1Q96HL8 342 aaPredicted RBP8.4□□□□□ -1.06
CD47-204ENST00000471694 QKIQ96PU8 341 aaKnown RBP eCLIP8.4□□□□□ -1.062e-6■■■■■ 80.9
CD47-204ENST00000471694 CPXM1Q96SM3 734 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 DNAJC18Q9H819 358 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 MEAF6Q9HAF1 191 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 CHST7Q9NS84 486 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 DNAAF2Q9NVR5 837 aaKnown RBP8.4□□□□□ -1.06
CD47-204ENST00000471694 FZD10Q9ULW2 581 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 GNEQ9Y223 722 aaKnown RBP8.4□□□□□ -1.06
CD47-204ENST00000471694 RUVBL1Q9Y265 456 aaKnown RBP8.4□□□□□ -1.06
CD47-204ENST00000471694 ERGIC3Q9Y282 383 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 AP4S1Q9Y587 144 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 PCDHGA3Q9Y5H0 932 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 EFCAB7A8K855 629 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 E7EQ34 232 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 RFXAPO00287 272 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 CPNE3O75131 537 aaKnown RBP8.4□□□□□ -1.06
CD47-204ENST00000471694 BPNT1O95861 308 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 C5AR1P21730 350 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 PTGER3P43115 390 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 ZNF267Q14586 743 aaPredicted RBP8.4□□□□□ -1.06
CD47-204ENST00000471694 GTF2IRD2BQ6EKJ0 949 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 SHQ1Q6PI26 577 aaKnown RBP8.4□□□□□ -1.06
CD47-204ENST00000471694 GTF2IRD2Q86UP8 949 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 FAM71AQ8IYT1 594 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 ENKURQ8TC29 256 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 RORBQ92753 470 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 RNF39Q9H2S5 420 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 DYNLRB1Q9NP97 96 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 NINJ2Q9NZG7 142 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 XPR1Q9UBH6 696 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 CAMK2AQ9UQM7 478 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 MID1O15344 667 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 SCO2O43819 266 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 LYPLA2O95372 231 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 TNFAIP8O95379 198 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 SPATA31C1P0DKV0 1188 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 HHEXQ03014 270 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 SNAPC1Q16533 368 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 ZNF805Q5CZA5 627 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 LRRC66Q68CR7 880 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 CXorf57Q6NSI4 855 aaKnown RBP8.4□□□□□ -1.06
CD47-204ENST00000471694 AADACL2Q6P093 401 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 TMPRSS11AQ6ZMR5 421 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 TRAPPC6BQ86SZ2 158 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 TMEFF1Q8IYR6 380 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 PROKR2Q8NFJ6 384 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms