RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 KIR2DS3K7RE56 304 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 TM9SF1O15321 606 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 SIGLEC6O43699 453 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 NRP2O60462 931 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 SNX2O60749 519 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 SNNO75324 88 aaPredicted RBP9.59□□□□□ -0.87
SF3A1-207ENST00000471342 TBX6O95947 436 aaPredicted RBP9.59□□□□□ -0.87
SF3A1-207ENST00000471342 CFIP05156 583 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 RBP1P09455 135 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 CPA3P15088 417 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 CHN1P15882 459 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 NPPBP16860 134 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 TAC1P20366 129 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 OAS2P29728 719 aaKnown RBP9.59□□□□□ -0.87
SF3A1-207ENST00000471342 PRDX3P30048 256 aaKnown RBP9.59□□□□□ -0.87
SF3A1-207ENST00000471342 PKLRP30613 574 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 DPP6P42658 865 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 SERPINB4P48594 390 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 CCT5P48643 541 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 RPIAP49247 311 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 PPP1CAP62136 330 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 SPEM2Q0P670 501 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 ILF3Q12906 894 aaKnown RBP eCLIP9.59□□□□□ -0.87
SF3A1-207ENST00000471342 PRKG2Q13237 762 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 GPR18Q14330 331 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 KIR2DS5Q14953 304 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 PCBP2Q15366 365 aaKnown RBP eCLIP9.59□□□□□ -0.87
SF3A1-207ENST00000471342 ELOCQ15369 112 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 FAM83EQ2M2I3 478 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 TSNAXIP1Q2TAA8 658 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 TTLL9Q3SXZ7 439 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 TAF1BQ53T94 588 aaPredicted RBP9.59□□□□□ -0.87
SF3A1-207ENST00000471342 ZNF678Q5SXM1 525 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 CGB2Q6NT52 195 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 TAF8Q7Z7C8 310 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 GPSM1Q86YR5 675 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 CNPY4Q8N129 248 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 PPFIBP2Q8ND30 876 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 FAM46DQ8NEK8 389 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 OR2A1Q8NGT9 310 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 OR9A1PQ8NGU1 263 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 ZNF483Q8TF39 744 aaPredicted RBP9.59□□□□□ -0.87
SF3A1-207ENST00000471342 C12orf66Q96MD2 445 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 PPM1MQ96MI6 270 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 CENPHQ9H3R5 247 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 XKR8Q9H6D3 395 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 MVB12BQ9H7P6 319 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 UTP6Q9NYH9 597 aaKnown RBP9.59□□□□□ -0.87
SF3A1-207ENST00000471342 NLGN3Q9NZ94 848 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 HAO1Q9UJM8 370 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 PCTPQ9UKL6 214 aa9.59□□□□□ -0.87
SF3A1-207ENST00000471342 DMXL1Q9Y485 3027 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 EME2A4GXA9 379 aaPredicted RBP9.58□□□□□ -0.88
SF3A1-207ENST00000471342 STX16-NPEPL1H3BU86 382 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 OR7A17O14581 309 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 ZNF195O14628 629 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 STX16O14662 325 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 KHNYNO15037 678 aaKnown RBP9.58□□□□□ -0.88
SF3A1-207ENST00000471342 DKK1O94907 266 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 LMNAP02545 664 aaKnown RBP9.58□□□□□ -0.88
SF3A1-207ENST00000471342 ENO2P09104 434 aaPredicted RBP9.58□□□□□ -0.88
SF3A1-207ENST00000471342 NR1D1P20393 614 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 IMPDH1P20839 514 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 ATP5F1P24539 256 aaPredicted RBP9.58□□□□□ -0.88
SF3A1-207ENST00000471342 RGS4P49798 205 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 SLC12A2P55011 1212 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 SQSTM1Q13501 440 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 PTCHD3Q3KNS1 767 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 UGT3A2Q3SY77 523 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 CCDC153Q494R4 210 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 C14orf28Q4W4Y0 310 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 PERM1Q5SV97 790 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 ZNF574Q6ZN55 896 aaPredicted RBP9.58□□□□□ -0.88
SF3A1-207ENST00000471342 RGS9BPQ6ZS82 235 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 ZCCHC23Q6ZST2 131 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 ADAMTSL2Q86TH1 951 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 ZNF761Q86XN6 746 aaPredicted RBP9.58□□□□□ -0.88
SF3A1-207ENST00000471342 DCUN1D3Q8IWE4 304 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 MYO1HQ8N1T3 1032 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 CFAP61Q8NHU2 1237 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 CKAP2Q8WWK9 683 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 ATOH1Q92858 354 aaPredicted RBP9.58□□□□□ -0.88
SF3A1-207ENST00000471342 APOLD1Q96LR9 279 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 ZNF317Q96PQ6 595 aaPredicted RBP9.58□□□□□ -0.88
SF3A1-207ENST00000471342 TSSK1BQ9BXA7 367 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 TBC1D10AQ9BXI6 508 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 SPNS1Q9H2V7 528 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 OSGEPL1Q9H4B0 414 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 CCDC134Q9H6E4 229 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 NCKIPSDQ9NZQ3 722 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 SEMA5BQ9P283 1151 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 ASF1AQ9Y294 204 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 GVINP1Q7Z2Y8 2422 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 ADAMTS9Q9P2N4 1935 aa9.58□□□□□ -0.88
SF3A1-207ENST00000471342 DCHS1Q96JQ0 3298 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 A0A1W2PQM1 296 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 PDZK1P1A8MUH7 402 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 B4DGG1 531 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 KLF11O14901 512 aa9.57□□□□□ -0.88
SF3A1-207ENST00000471342 BIRC5O15392 142 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms